Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FAM206BP-201ENST00000510179 541 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 TMEM248P1-201ENST00000510579 951 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.680-201ENST00000516441 93 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RNU6-255P-201ENST00000516957 105 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 EEF1B2P2-201ENST00000519625 676 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RPL26P30-202ENST00000602923 645 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AP001823.1-201ENST00000604056 1003 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC020634.1-201ENST00000608701 549 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 MIR6809-201ENST00000612189 116 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 LINC00294-201ENST00000631190 3306 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 MAPK10-329ENST00000641555 2656 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ERCC6-202ENST00000374127 1782 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 MTCO1P25-201ENST00000414449 1799 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 HSPA8P11-201ENST00000508840 1898 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL512646.1-201ENST00000269395 1077 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RNU6-774P-201ENST00000363238 107 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RNU4-2-201ENST00000365668 141 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1109P-201ENST00000391187 107 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CYB5AP4-201ENST00000396692 399 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC013442.1-201ENST00000397347 228 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 FTH1P16-201ENST00000435241 552 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AL359672.1-201ENST00000442302 409 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CYCSP51-201ENST00000443545 318 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CEACAMP7-201ENST00000444105 496 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 MTCO1P27-201ENST00000448269 226 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RPS29P33-201ENST00000456717 146 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RPL30P15-201ENST00000457129 321 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RN7SL738P-201ENST00000470264 297 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 MTND6P8-201ENST00000503471 522 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 RNU6-583P-201ENST00000516012 92 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.682-201ENST00000516457 100 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC025260.1-201ENST00000548858 430 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms