Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RPL31P61-201ENST00000496160 376 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 RN7SKP21-201ENST00000516503 220 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 CYCSP29-201ENST00000533731 318 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC018552.3-201ENST00000567416 561 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC117490.2-201ENST00000610042 594 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC023043.4-201ENST00000612081 449 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL133370.2-201ENST00000619934 439 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 MIR3653-201ENST00000625572 110 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC140479.6-201ENST00000633535 357 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL773545.4-201ENST00000637262 310 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL139254.3-201ENST00000641097 674 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL513478.4-201ENST00000641636 310 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC092162.3-201ENST00000624511 1624 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 USP9YP4-201ENST00000424401 1745 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC009313.2-201ENST00000417893 1941 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 SNORA70C-201ENST00000384538 135 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 RN7SKP235-201ENST00000410662 305 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 PGBD4P8-201ENST00000412993 562 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 RPL6P29-201ENST00000414863 865 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC007064.3-201ENST00000422608 359 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AL121578.1-201ENST00000428051 892 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CCRL1P1-201ENST00000449542 1053 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CALM1P2-201ENST00000452941 448 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 SNORA31.9-201ENST00000516429 84 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 RNA5SP73-201ENST00000516744 108 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 MRPL49P2-201ENST00000521066 465 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC079171.1-201ENST00000568788 914 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AP003497.2-201ENST00000624220 967 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC068724.3-201ENST00000625906 87 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 AC010329.2-201ENST00000595195 2737 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.23□□□□□ -1.73
C9orf72Q96LT7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf72Q96LT7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 RNU1-132P-201ENST00000364300 164 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AL603766.1-201ENST00000407763 664 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 SYT14P1-201ENST00000481459 721 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC041039.1-201ENST00000485656 536 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 RNA5SP519-201ENST00000516480 119 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AP003730.1-201ENST00000524605 285 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 TRAV8-5-201ENST00000537369 341 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC123786.2-201ENST00000603459 275 ntBASIC4.22□□□□□ -1.73
C9orf72Q96LT7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
C9orf72Q96LT7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf72Q96LT7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms