Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MTND1P17-201ENST00000448961 204 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 TVP23CP1-201ENST00000450317 639 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 RPL7AP23-201ENST00000482625 776 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AP002453.1-201ENST00000492327 668 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AC110794.1-201ENST00000505816 425 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC097473.1-201ENST00000508142 408 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC096754.1-201ENST00000508904 818 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC107222.1-201ENST00000510899 637 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-CQ95604 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-CQ95604 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AP001486.3-201ENST00000615334 372 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 uc_338.34-201ENST00000617467 174 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HLA-CQ95604 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.09□□□□□ -1.27
HLA-CQ95604 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AC134882.1-201ENST00000603738 1676 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HLA-CQ95604 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HLA-CQ95604 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
HLA-CQ95604 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HLA-CQ95604 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 TRIM51GP-201ENST00000534741 1350 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HLA-CQ95604 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 MIR649-201ENST00000384843 97 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 SOD2P1-201ENST00000396543 562 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.08□□□□□ -1.28
HLA-CQ95604 RNA5SP178-201ENST00000410380 128 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 RN7SKP235-201ENST00000410662 305 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 SKA2P1-201ENST00000425592 390 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 TIMM9P1-201ENST00000436122 256 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 GAPDHP48-201ENST00000436626 961 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 PRDX1P1-201ENST00000449329 596 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC104634.1-201ENST00000452720 462 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 SNRPFP3-201ENST00000457792 225 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC026336.1-201ENST00000466577 351 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC128716.1-201ENST00000475129 166 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 RPL7AP10-201ENST00000481016 791 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC104564.1-201ENST00000493028 407 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 RN7SKP96-201ENST00000516948 297 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 LSM6P2-201ENST00000552208 177 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC053481.3-201ENST00000577881 843 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.08□□□□□ -1.28
HLA-CQ95604 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC073539.2-201ENST00000597113 165 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 AC012409.4-201ENST00000612923 249 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 MIR6826-201ENST00000617808 98 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 U1.31-201ENST00000620022 160 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC008013.2-202ENST00000637965 364 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms