Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 ACTR3P2-201ENST00000439585 1257 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 ELOCP10-201ENST00000440624 327 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 VN1R25P-201ENST00000443385 738 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 VN1R40P-201ENST00000455196 941 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 RN7SL691P-201ENST00000494487 301 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 ATG10-AS1-201ENST00000504846 648 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC009643.1-201ENST00000532030 391 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC018552.3-201ENST00000567416 561 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC027281.1-201ENST00000574178 758 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 MIR4277-201ENST00000578298 84 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 ELOCP34-201ENST00000604436 327 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AP000255.1-201ENST00000610276 676 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 MIR486-1-201ENST00000612171 68 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 AL139254.3-201ENST00000641097 674 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 Z73965.1-201ENST00000623412 2297 ntBASIC3.44□□□□□ -1.86
RTN4IP1Q8WWV3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 MIR3074-201ENST00000384885 81 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 U3.22-201ENST00000391120 215 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RPS20P25-201ENST00000412447 352 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RWDD4P2-201ENST00000426392 563 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 ATP5HP2-201ENST00000433885 485 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RPL23AP46-201ENST00000438548 490 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC009963.2-201ENST00000453431 138 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RPL36AP13-201ENST00000457490 317 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RN7SL303P-201ENST00000469773 251 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RWDD4P1-201ENST00000488019 565 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC008958.1-201ENST00000511047 682 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 KCTD9P2-201ENST00000512203 1013 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC010342.1-201ENST00000514047 877 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RNA5SP49-201ENST00000516450 115 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 RNA5SP519-201ENST00000516480 119 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 DEFB109D-201ENST00000529497 240 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 OR8X1P-201ENST00000534542 869 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC079171.1-201ENST00000568788 914 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 MIR4700-201ENST00000578311 74 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 MRPS35P3-201ENST00000603189 709 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC123786.2-201ENST00000603459 275 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC004825.2-201ENST00000616634 455 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AL590410.1-201ENST00000617925 333 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AL121890.3-201ENST00000618494 516 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4IP1Q8WWV3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTN4IP1Q8WWV3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTN4IP1Q8WWV3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RTN4IP1Q8WWV3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RTN4IP1Q8WWV3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RTN4IP1Q8WWV3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms