Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 A2MP1-204ENST00000566278 4130 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 RNU6-1176P-201ENST00000390955 107 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AL451050.1-201ENST00000450126 415 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC087369.1-201ENST00000520775 996 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 CYCSP30-201ENST00000546447 172 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC027176.2-201ENST00000559166 746 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 AL132657.2-201ENST00000564417 358 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC110792.4-201ENST00000609843 298 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 AL391261.4-201ENST00000616012 481 ntBASIC4.94□□□□□ -1.62
SNED1Q8TER0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNED1Q8TER0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNED1Q8TER0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 Y_RNA.110-201ENST00000363220 99 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 MIR137-201ENST00000385223 102 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 SKP1P3-201ENST00000429280 487 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 HMGN2P31-201ENST00000432430 273 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC104306.1-201ENST00000449702 371 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC098583.1-201ENST00000480875 255 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 DUXAP2-201ENST00000519198 589 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 RPL21P7-201ENST00000557463 483 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC009268.1-201ENST00000561352 1203 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 MTND4LP25-201ENST00000570218 163 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 VN1R81P-201ENST00000602085 372 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC007342.8-201ENST00000623278 678 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC104820.1-201ENST00000624183 307 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 AL034408.1-202ENST00000636088 415 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC125336.1-201ENST00000508893 2827 ntBASIC4.93□□□□□ -1.62
SNED1Q8TER0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SNED1Q8TER0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNED1Q8TER0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNED1Q8TER0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNED1Q8TER0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 RNA5SP399-201ENST00000364003 117 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNED1Q8TER0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL138787.1-202ENST00000437804 898 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 PRDX3P3-201ENST00000447765 522 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 PDSS1P2-201ENST00000449397 678 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 PLGLA-201ENST00000465668 449 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 SCARNA13-201ENST00000516672 275 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AP000889.1-201ENST00000530968 660 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC100770.1-201ENST00000532310 322 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL358913.1-201ENST00000554342 121 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL731537.2-201ENST00000561565 951 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 BNIP3P27-201ENST00000599991 412 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL357094.1-201ENST00000603845 844 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms