Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL158156.1-201ENST00000422509 473 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 PDSS1P2-201ENST00000449397 678 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 RPL38P1-201ENST00000460914 211 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC005520.3-201ENST00000602874 370 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC026979.4-201ENST00000606555 645 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC016957.2-201ENST00000616998 848 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 SNORA3.3-201ENST00000408712 125 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC083863.1-201ENST00000438811 231 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 RPS3AP46-201ENST00000448352 682 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP97-201ENST00000365006 84 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 CYCSP4-201ENST00000429682 331 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AL031584.1-201ENST00000447169 754 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC005008.1-201ENST00000456151 612 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 FTH1P9-201ENST00000513251 355 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 CYCSP30-201ENST00000546447 172 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC084759.1-201ENST00000561168 290 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 MIR4672-201ENST00000583126 81 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC091905.2-201ENST00000623143 306 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC138627.1-204ENST00000641894 765 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AL132656.3-201ENST00000606384 1595 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 NMNAT1P2-201ENST00000435192 860 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC006011.1-201ENST00000442758 349 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RANP8-201ENST00000444720 713 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RN7SKP57-201ENST00000517248 293 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC087369.1-201ENST00000520775 996 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 MIR3922-201ENST00000585192 84 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AL021877.2-201ENST00000624442 10684 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AL390879.2-203ENST00000426943 1121 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC022795.1-201ENST00000473808 480 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RNU7-143P-201ENST00000516781 65 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC090281.1-201ENST00000523019 276 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC069240.1-201ENST00000548774 375 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC068790.5-201ENST00000602741 355 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC133552.5-201ENST00000604266 540 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 AC090246.1-201ENST00000616499 426 ntBASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.66□□□□□ -1.98
ALMS1Q8TCU4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP374-201ENST00000362939 125 ntBASIC2.65□□□□□ -1.98
ALMS1Q8TCU4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms