Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 HNRNPKP5-201ENST00000515300 253 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC010476.1-201ENST00000519111 851 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 UBTFL9-201ENST00000534504 1148 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 TRAV8-5-201ENST00000537369 341 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 NF1P5-201ENST00000588287 448 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC090948.1-201ENST00000607464 549 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC116651.1-201ENST00000609724 556 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 MIR4727-201ENST00000622232 55 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AL158163.1-201ENST00000603915 1649 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 RN7SKP235-201ENST00000410662 305 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AL391219.1-201ENST00000422570 483 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 RPS3AP54-201ENST00000435535 734 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AL157884.3-201ENST00000448273 1184 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 RPL23AP81-201ENST00000455252 467 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 SEPT14P1-201ENST00000458703 648 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC017007.3-201ENST00000479865 435 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 Vault.1-201ENST00000516474 102 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC063950.1-201ENST00000552036 308 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC068831.4-201ENST00000556118 109 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 AC008785.1-201ENST00000624475 456 ntBASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.01□□□□□ -1.77
CLHC1Q8NHS4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLHC1Q8NHS4 EIF2AP4-201ENST00000424793 1781 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 CYB5AP4-201ENST00000396692 399 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 AL590139.1-201ENST00000416267 400 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC114814.2-201ENST00000419195 485 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 USP9YP7-201ENST00000436723 430 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AL512326.1-201ENST00000443050 721 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 USP9YP32-201ENST00000452432 430 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 RPL31P53-201ENST00000457065 348 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 SNX5P1-201ENST00000505757 1041 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 SNORA70.14-201ENST00000516205 110 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLHC1Q8NHS4 MTCO2P22-201ENST00000603246 681 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AL355816.1-201ENST00000607951 118 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC023043.4-201ENST00000612081 449 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 AC073342.3-201ENST00000624211 193 ntBASIC4□□□□□ -1.77
CLHC1Q8NHS4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLHC1Q8NHS4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLHC1Q8NHS4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CLHC1Q8NHS4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms