Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GTF2IP12-201ENST00000456547 356 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 CYCSP34-201ENST00000458172 304 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 RPL7P48-201ENST00000461513 746 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 RPS4XP6-201ENST00000477670 797 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AL445423.1-201ENST00000609941 536 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AC012409.3-201ENST00000611343 981 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
BEST2Q8NFU1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
BEST2Q8NFU1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 ZNF849P-201ENST00000594711 1566 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 RNA5SP27-201ENST00000363839 119 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 SNORA70.2-201ENST00000364506 135 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 VTA1P1-201ENST00000414044 866 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AP001324.1-201ENST00000428553 399 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 HSFY3P-201ENST00000444242 1191 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL009048.1-201ENST00000450437 298 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 OFD1P3Y-201ENST00000453312 783 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 RPL10P17-201ENST00000453852 316 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 RPL21P126-201ENST00000470049 478 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC091163.3-201ENST00000518269 1144 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC018442.3-201ENST00000523025 183 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC025260.1-201ENST00000548858 430 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 MIR548Y-201ENST00000582739 110 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC091178.1-203ENST00000584586 279 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC090525.3-201ENST00000605601 189 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 CYCSP41-201ENST00000616920 296 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL731566.2-201ENST00000618971 317 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AL035461.2-201ENST00000619201 524 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC068787.1-201ENST00000623908 691 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 CPHL1P-201ENST00000461341 3407 ntBASIC4.88□□□□□ -1.63
BEST2Q8NFU1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
BEST2Q8NFU1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 LINC00622-201ENST00000562811 1570 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 RPL23AP59-201ENST00000399415 461 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 FCF1P5-201ENST00000406490 482 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 RN7SKP199-201ENST00000410325 305 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 RNU4-25P-201ENST00000410569 230 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 AC013404.1-201ENST00000413068 249 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 LINC01881-201ENST00000416103 412 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.87□□□□□ -1.63
BEST2Q8NFU1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 AL356387.2-201ENST00000422272 243 ntBASIC4.87□□□□□ -1.63
BEST2Q8NFU1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms