Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK2A3Q8NEV1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.34□□□□□ -1.71
CSNK2A3Q8NEV1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.34□□□□□ -1.71
CSNK2A3Q8NEV1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK2A3Q8NEV1 AC134882.1-201ENST00000603738 1676 ntBASIC4.34□□□□□ -1.71
CSNK2A3Q8NEV1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.34□□□□□ -1.72
CSNK2A3Q8NEV1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CSNK2A3Q8NEV1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CSNK2A3Q8NEV1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CSNK2A3Q8NEV1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL034370.1-201ENST00000397254 1590 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL512646.1-201ENST00000269395 1077 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 SNORA73.1-201ENST00000363107 205 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 FCF1P5-201ENST00000406490 482 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 RNU6-272P-201ENST00000411028 104 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 CNOT7P1-201ENST00000429006 852 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 RPS26P40-201ENST00000435209 294 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 MTCYBP31-201ENST00000438855 1122 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC004865.1-201ENST00000442276 1003 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 Z77249.1-201ENST00000444622 1175 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC007327.1-201ENST00000447461 264 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL356981.1-201ENST00000454879 684 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL591473.1-201ENST00000464297 313 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC011979.1-201ENST00000472300 483 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 BOLA3P3-201ENST00000505182 232 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC008885.2-201ENST00000509506 930 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC109471.1-201ENST00000511631 612 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 RPL23AP53-201ENST00000521854 457 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 MTATP6P15-201ENST00000527233 835 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC022832.1-201ENST00000530718 645 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AC015871.5-202ENST00000623252 701 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 AF001550.2-201ENST00000636643 217 ntBASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK2A3Q8NEV1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 SNORA66-201ENST00000384792 133 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 U3.36-201ENST00000408418 213 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 MIR1271-201ENST00000408537 86 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 SNORA77-201ENST00000408716 125 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 HIGD1AP4-201ENST00000430194 280 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 MTCO2P20-201ENST00000437339 673 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 FGF7P5-201ENST00000441829 291 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 RPL7AP61-201ENST00000443410 636 ntBASIC4.32□□□□□ -1.72
CSNK2A3Q8NEV1 OR7E125P-201ENST00000443450 846 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms