Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC50Q8IVM0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC50Q8IVM0 AC092162.3-201ENST00000624511 1624 ntBASIC4.39□□□□□ -1.71
CCDC50Q8IVM0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 BDP1P-201ENST00000582658 1990 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC008725.1-201ENST00000605123 2263 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 SNORA3C-201ENST00000408792 125 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 RPL6P29-201ENST00000414863 865 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 RPL12P46-201ENST00000436610 195 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 RPL23AP46-201ENST00000438548 490 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 ARL5AP3-201ENST00000439327 386 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 VN1R48P-201ENST00000448149 1036 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 BNIP3P41-201ENST00000503774 571 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 CDH12P2-201ENST00000504393 298 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 PCNAP1-201ENST00000505363 709 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC034244.2-201ENST00000514668 858 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC022784.5-201ENST00000522241 437 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AC063949.1-201ENST00000552900 865 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AL034351.1-201ENST00000605288 668 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 AL158163.1-201ENST00000603915 1649 ntBASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC50Q8IVM0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RNU1-14P-201ENST00000362759 152 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RN7SKP235-201ENST00000410662 305 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL590139.1-201ENST00000416267 400 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RPL12P28-201ENST00000430852 489 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AC007563.3-201ENST00000433233 371 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RPS3AP54-201ENST00000435535 734 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL353898.1-201ENST00000444055 238 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RPL7AP52-201ENST00000458096 790 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AF213884.1-201ENST00000488102 463 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AC013356.1-201ENST00000489027 564 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 SNORA70.17-201ENST00000516449 133 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 OR8G5-201ENST00000524943 1041 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AC137768.1-201ENST00000549998 553 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 CBX3P5-201ENST00000552017 521 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AL109741.3-201ENST00000561748 592 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 MIR6730-201ENST00000622213 67 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 RPL23AP61-201ENST00000623642 466 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 EIF2AP4-201ENST00000424793 1781 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 AP000756.2-201ENST00000624168 2567 ntBASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC50Q8IVM0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 Z98941.1-201ENST00000407764 100 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 RN7SKP222-201ENST00000410651 315 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 P2RY10P2-201ENST00000416730 913 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 MORF4L1P4-201ENST00000450245 976 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 RPL23AP24-201ENST00000458203 385 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 RNU6-775P-201ENST00000459318 96 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC108471.1-201ENST00000513977 287 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms