Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC020910.2-201ENST00000603635 610 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC025175.1-201ENST00000606482 759 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC005962.2-201ENST00000611427 652 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC068831.8-201ENST00000620171 435 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC091905.2-201ENST00000623143 306 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AC011944.2-201ENST00000624440 683 ntBASIC4.17□□□□□ -1.74
CCDC71Q8IV32 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC71Q8IV32 HSPA8P17-201ENST00000427029 1382 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC025031.4-201ENST00000621248 3271 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CASC19-284ENST00000642142 1868 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RN7SKP227-201ENST00000364445 330 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 SNORA71.2-201ENST00000364941 134 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RNU1-63P-201ENST00000383902 164 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 MIR513A2-201ENST00000385249 127 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 HMGB1P10-201ENST00000395823 563 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RNU2-17P-201ENST00000410290 190 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RPL17P36-201ENST00000420302 549 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC022022.1-201ENST00000430304 178 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 HLA-N-201ENST00000437516 135 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL133244.1-201ENST00000456007 258 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC011276.1-201ENST00000469688 323 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC109327.1-201ENST00000471666 403 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RNA5SP154-201ENST00000516193 111 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 HIGD1AP18-201ENST00000520730 278 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC090819.1-201ENST00000523800 1111 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 NPM1P35-201ENST00000533043 868 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC093510.2-201ENST00000562820 896 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC106785.3-201ENST00000564064 847 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC103792.1-201ENST00000603591 919 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL139395.1-201ENST00000603662 160 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC079880.2-201ENST00000603790 1213 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL049844.2-201ENST00000604280 628 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL133338.2-201ENST00000604292 736 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 BNIP3P19-201ENST00000605397 577 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC145207.9-201ENST00000623802 325 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 OR56B2P-202ENST00000641377 2453 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 AC090971.4-201ENST00000560291 1800 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 CCT8P1-201ENST00000413611 1657 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 RAD17P1-201ENST00000418130 2042 ntBASIC4.16□□□□□ -1.74
CCDC71Q8IV32 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC71Q8IV32 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC71Q8IV32 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.74
CCDC71Q8IV32 AC108467.2-201ENST00000617640 1597 ntBASIC4.15□□□□□ -1.74
CCDC71Q8IV32 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CCDC71Q8IV32 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC71Q8IV32 MTCO1P4-201ENST00000520516 1409 ntBASIC4.15□□□□□ -1.74
CCDC71Q8IV32 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC71Q8IV32 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC71Q8IV32 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71Q8IV32 RHOT1P2-201ENST00000366423 333 ntBASIC4.15□□□□□ -1.75
CCDC71Q8IV32 RNU4-31P-201ENST00000384211 141 ntBASIC4.15□□□□□ -1.75
CCDC71Q8IV32 RNU6-532P-201ENST00000384318 107 ntBASIC4.15□□□□□ -1.75
CCDC71Q8IV32 TATDN1P1-201ENST00000414123 891 ntBASIC4.15□□□□□ -1.75
CCDC71Q8IV32 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71Q8IV32 UBE2D3P3-201ENST00000426992 425 ntBASIC4.15□□□□□ -1.75
CCDC71Q8IV32 AC004975.1-201ENST00000428733 208 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms