Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-289P-201ENST00000364093 107 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RNU4-2-201ENST00000365668 141 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 SNORA51.6-201ENST00000384151 125 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RNU6-1011P-201ENST00000384668 107 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AL024474.1-201ENST00000404655 591 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RNU6-248P-201ENST00000410720 107 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AL109913.1-201ENST00000421173 514 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 NMD3P2-201ENST00000421815 761 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 GLRXP1-201ENST00000423261 334 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC011742.2-201ENST00000443818 352 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RPL23AP60-201ENST00000450011 454 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC099563.1-201ENST00000456086 418 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RPS3AP17-201ENST00000472594 777 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 OR52A4P-201ENST00000472867 958 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 FTH1P24-201ENST00000503502 462 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC008629.2-201ENST00000503783 483 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 DUTP7-201ENST00000507982 486 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 NDUFB4P2-201ENST00000509515 391 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 Y_RNA.702-201ENST00000516843 96 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC104986.1-201ENST00000517978 436 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 HMGN2P36-201ENST00000529541 409 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 NPM1P42-201ENST00000560329 862 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC020765.1-201ENST00000604296 328 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 IMMP1LP1-201ENST00000605170 488 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AC004009.2-201ENST00000623016 728 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AL691477.1-201ENST00000624398 162 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 AL591848.4-201ENST00000567832 3472 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 HSPA8P18-201ENST00000439846 1928 ntBASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPAS4Q8IUM7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC079097.1-201ENST00000512187 1399 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MFSD8-239ENST00000641590 2479 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RNA5SP46-201ENST00000362370 120 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RNA5SP391-201ENST00000363456 119 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RN7SKP160-201ENST00000363804 340 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RNA5SP132-201ENST00000364725 118 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MIR181A1-201ENST00000385026 110 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AL031679.1-201ENST00000400616 525 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 SSXP10-201ENST00000402595 565 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 OR2AT2P-201ENST00000413438 905 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NPM1P4-201ENST00000414095 812 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 TPMTP2-201ENST00000414372 726 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 Z93019.1-201ENST00000416450 973 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RPL36P18-201ENST00000419316 318 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC127526.2-201ENST00000426436 775 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NPM1P34-201ENST00000428821 893 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 DNAJC19P4-201ENST00000440115 345 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RABEPKP1-201ENST00000440529 1026 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MTND5P14-201ENST00000441481 1267 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RPL7P36-201ENST00000444633 681 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 NANOGNBP1-201ENST00000448444 480 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RPS27AP3-201ENST00000453803 454 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MTND6P6-201ENST00000478031 263 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC090453.1-201ENST00000495560 436 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 RN7SL466P-201ENST00000497546 295 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC008945.1-201ENST00000505144 499 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms