Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL389915.2-201ENST00000454576 441 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RNU7-140P-201ENST00000459546 60 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC005532.2-201ENST00000467154 373 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 PRDX3P4-201ENST00000470828 747 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RPSAP50-201ENST00000481955 852 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC004815.1-201ENST00000484185 331 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RN7SL97P-201ENST00000486780 299 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC005798.1-201ENST00000513715 387 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 ENPP7P9-201ENST00000514456 627 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RNU4-60P-201ENST00000517239 135 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC092451.2-201ENST00000538746 658 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RFPL1S-203ENST00000539579 330 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC022069.1-201ENST00000582910 658 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 BNIP3P32-201ENST00000600015 554 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC112230.1-201ENST00000604342 547 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC013468.1-201ENST00000608680 598 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AL049536.1-201ENST00000625043 744 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.3□□□□□ -1.72
C11orf88Q6PI97 MTND5P3-201ENST00000438536 1800 ntBASIC4.3□□□□□ -1.72
C11orf88Q6PI97 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 SNORA17.1-201ENST00000362945 126 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 RN7SKP113-201ENST00000363891 295 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 RPL22P22-201ENST00000395439 379 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL645733.1-201ENST00000402250 217 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 TMBIM7P-201ENST00000418074 855 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC005033.1-201ENST00000428904 813 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL590399.6-201ENST00000446396 307 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 OTX2P1-201ENST00000450956 354 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AP000873.1-201ENST00000463987 400 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC146507.1-201ENST00000468335 354 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 RN7SL222P-201ENST00000476452 299 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 RN7SL441P-201ENST00000492388 296 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AP004607.2-201ENST00000533949 322 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC006518.2-201ENST00000542513 940 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 MTCO1P40-201ENST00000574371 625 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL390816.3-201ENST00000604527 1066 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL049634.3-201ENST00000604968 457 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC018926.1-201ENST00000616335 435 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC095050.2-201ENST00000510748 1458 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 AC073429.2-201ENST00000569694 1444 ntBASIC4.29□□□□□ -1.72
C11orf88Q6PI97 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C11orf88Q6PI97 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms