Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 ARL5AP3-201ENST00000439327 386 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 RPS20P4-201ENST00000461659 355 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC068587.1-201ENST00000483613 781 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC006064.5-201ENST00000541782 248 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC092868.3-201ENST00000560515 784 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC006116.5-201ENST00000591936 559 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AL135786.2-201ENST00000608422 615 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC020923.1-201ENST00000624021 917 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CTR9Q6PD62 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 VPS35P1-201ENST00000563400 1518 ntBASIC5.07□□□□□ -1.6
CTR9Q6PD62 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTR9Q6PD62 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 MTND4P21-201ENST00000453886 1357 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC006971.1-201ENST00000407916 4486 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 RNA5SP22-201ENST00000365393 109 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 EIF1P3-201ENST00000423841 334 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 COX6CP15-201ENST00000426313 211 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 COX6B1P7-201ENST00000430845 235 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 CEACAMP1-201ENST00000434624 1035 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AL138787.1-202ENST00000437804 898 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 CCRL1P1-201ENST00000449542 1053 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 RPS27AP13-201ENST00000498403 237 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 PCNAP1-201ENST00000505363 709 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 PPBPP1-201ENST00000510807 373 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC099522.1-202ENST00000514718 367 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC010857.1-201ENST00000606398 594 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC103858.2-201ENST00000621471 543 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC068724.3-201ENST00000625906 87 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.06□□□□□ -1.6
CTR9Q6PD62 MIR492-201ENST00000638676 116 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTR9Q6PD62 AC093311.1-201ENST00000506586 2021 ntBASIC5.06□□□□□ -1.6
CTR9Q6PD62 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 SNORA27.3-201ENST00000364937 134 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 OR13C3-201ENST00000374781 1108 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 RPL5P19-201ENST00000404228 893 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 YWHAEP5-201ENST00000431545 765 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 STRADBP1-201ENST00000478954 1281 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC104164.2-201ENST00000496953 495 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 COL6A4P2-205ENST00000509855 506 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 DEFB109D-201ENST00000529497 240 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms