Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 Y_RNA.693-201ENST00000516641 110 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 OR4A45P-201ENST00000529954 901 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL355375.2-201ENST00000574825 175 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AP005119.1-201ENST00000580956 292 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC011712.1-201ENST00000588959 234 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC006504.6-201ENST00000590142 199 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL355802.3-201ENST00000607571 545 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC245014.3-201ENST00000618589 347 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL137067.2-201ENST00000621202 131 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 MTND5P1-201ENST00000445440 1375 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AP002512.4-202ENST00000641599 4530 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 DCAF13P1-201ENST00000495256 1330 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AL121768.1-201ENST00000613917 2544 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 MTND5P3-201ENST00000438536 1800 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 RNU6-433P-201ENST00000363216 104 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 SNRPEP2-201ENST00000397592 279 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 Z97832.1-201ENST00000402490 328 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 MIR1178-201ENST00000408396 91 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AL354868.1-201ENST00000417077 482 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 RPS26P13-201ENST00000419030 330 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 HMGB1P45-201ENST00000435986 653 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 ACTR3P2-201ENST00000439585 1257 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC021660.1-201ENST00000465006 554 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 SNRPCP3-201ENST00000474888 476 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 GAPDHP39-201ENST00000481866 979 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 NIFKP7-201ENST00000503365 834 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AF131216.2-201ENST00000512316 564 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC112191.2-201ENST00000522428 333 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC136777.2-201ENST00000522979 358 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC007424.1-203ENST00000554613 687 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC092121.1-201ENST00000569452 202 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AL163952.1-202ENST00000569625 600 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 SNORD95-201ENST00000579879 68 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 VN1R80P-201ENST00000597126 338 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 SUGT1P3-202ENST00000604259 383 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 MIR6809-201ENST00000612189 116 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF43Q68DV7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF43Q68DV7 AL731532.1-201ENST00000623972 4236 ntBASIC6.3□□□□□ -1.4
RNF43Q68DV7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF43Q68DV7 OR52B3P-201ENST00000314715 928 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 RNU1-134P-201ENST00000362935 165 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 RNU6-1085P-201ENST00000363576 107 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF43Q68DV7 RNA5SP156-201ENST00000410250 110 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 Y_RNA.598-201ENST00000410480 95 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 RNU2-42P-201ENST00000410697 113 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 RN7SKP286-201ENST00000410894 299 ntBASIC6.29□□□□□ -1.4
RNF43Q68DV7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF43Q68DV7 AC109780.2-201ENST00000413467 845 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms