Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-921P-201ENST00000384361 107 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-331P-201ENST00000384724 107 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-1106P-201ENST00000390845 107 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ARF4P3-201ENST00000397387 509 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RPL7P60-201ENST00000397636 735 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL356421.1-201ENST00000403255 413 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL355375.1-201ENST00000405686 392 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL133384.1-201ENST00000412744 351 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RPL34P3-201ENST00000421454 338 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC096632.1-201ENST00000427395 310 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RPS4XP10-201ENST00000465034 731 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 GMFBP1-201ENST00000467831 427 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RPL21P99-201ENST00000480369 423 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RPL7AP10-201ENST00000481016 791 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC083904.1-201ENST00000487828 231 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC120036.3-201ENST00000517826 292 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 NARSP2-201ENST00000518524 679 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 SOD1P3-201ENST00000518682 454 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ST13P6-201ENST00000522430 1102 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL591767.3-201ENST00000554632 525 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ACTG1P15-201ENST00000570019 1063 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 MRPS21P9-201ENST00000571150 257 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AL355598.1-201ENST00000604169 202 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 APOOP1-201ENST00000604695 592 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CTHRC1P1-201ENST00000605383 469 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC015908.5-201ENST00000623289 343 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 CDY7P-201ENST00000429883 1604 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AC090132.1-201ENST00000524071 1480 ntBASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRPF38BQ5VTL8 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 MAPK10-287ENST00000641217 3037 ntBASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRPF38BQ5VTL8 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC067945.1-201ENST00000342609 618 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RN7SKP44-201ENST00000363602 316 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 CISD1P1-201ENST00000393907 327 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AL157702.1-201ENST00000398764 426 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RPL37P1-201ENST00000432310 284 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AL353662.1-201ENST00000439099 327 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 ARL2BPP10-201ENST00000446487 531 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RPL35AP28-201ENST00000459730 331 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AL133445.1-201ENST00000467051 452 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RPL23AP41-201ENST00000484754 458 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC021220.1-201ENST00000507445 630 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RN7SKP96-201ENST00000516948 297 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms