Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC092807.2-201ENST00000609367 243 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC138649.5-201ENST00000637456 137 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CKAP2P1-201ENST00000555477 2049 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC108467.2-201ENST00000617640 1597 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC024560.2-201ENST00000507981 1497 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 U8.3-201ENST00000363321 132 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 U3.7-201ENST00000363668 216 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AL162578.1-201ENST00000406202 378 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 MRPL53P1-201ENST00000414323 319 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 MTATP6P29-201ENST00000415057 132 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 MTCYBP9-201ENST00000431021 303 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 RPS7P3-201ENST00000443360 580 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 RN7SL610P-201ENST00000463845 291 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 RPL5P12-201ENST00000477071 851 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 RN7SL727P-201ENST00000482164 296 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 IMMP1LP3-201ENST00000604197 224 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC115286.1-201ENST00000604298 434 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC112187.2-201ENST00000604345 283 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC118658.2-201ENST00000618697 459 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC009268.2-201ENST00000621925 457 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 AC013488.1-201ENST00000526618 1838 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.61□□□□□ -1.19
RC3H1Q5TC82 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RC3H1Q5TC82 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AP004289.1-201ENST00000436307 2205 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RNU6-359P-201ENST00000365466 108 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 SNORA22B-201ENST00000383876 138 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RNU6-533P-201ENST00000384144 107 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 Y_RNA.445-201ENST00000384168 102 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 NMD3P2-201ENST00000421815 761 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RPL34P27-201ENST00000428810 349 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 CFL1P1-202ENST00000432948 411 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 EEF1B2P6-201ENST00000445713 673 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RNU6-1208P-201ENST00000459588 107 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC099521.1-201ENST00000482557 334 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC073522.1-201ENST00000483312 377 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RN7SL283P-201ENST00000489055 303 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC109481.1-201ENST00000509173 282 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RNU6-615P-201ENST00000516065 106 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 IGHV1-14-201ENST00000523391 241 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms