Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 HMGB3P13-201ENST00000511263 607 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC112206.4-201ENST00000515142 405 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 IGKV2-18-201ENST00000522607 343 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 OR10G5P-201ENST00000532733 358 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.25□□□□□ -1.73
SCN1BQ07699 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SCN1BQ07699 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC090666.1-201ENST00000578241 445 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC126365.2-201ENST00000580630 379 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 SGO1P1-201ENST00000603525 1447 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC002487.1-201ENST00000604565 994 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC099785.1-201ENST00000605697 437 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 HSPE1P14-201ENST00000605812 302 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AP000864.1-201ENST00000609424 650 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 RPSAP73-201ENST00000614820 330 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 AC139713.2-210ENST00000641741 992 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.25□□□□□ -1.73
SCN1BQ07699 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SCN1BQ07699 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SCN1BQ07699 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN1BQ07699 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.24□□□□□ -1.73
SCN1BQ07699 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SCN1BQ07699 RNA5SP52-201ENST00000362448 134 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 SNORA17.1-201ENST00000362945 126 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 OR1L1-202ENST00000373686 1083 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 SNORA70-201ENST00000384436 135 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 MCTS2P-201ENST00000394552 546 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL603865.2-201ENST00000401679 213 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL645733.1-201ENST00000402250 217 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL078604.1-201ENST00000404609 466 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 BX323845.1-201ENST00000432417 179 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 CKS1BP5-201ENST00000434172 273 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AL592437.1-201ENST00000443781 492 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC104651.2-201ENST00000447549 528 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 RPL21P71-201ENST00000465598 459 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AP000926.1-201ENST00000479573 241 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 RPS21P4-201ENST00000487122 248 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC024558.1-201ENST00000505008 528 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 PTGES3P3-201ENST00000511479 482 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC119751.1-201ENST00000513357 765 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 HIGD1AP3-201ENST00000515857 278 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 RN7SKP260-201ENST00000516907 149 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 OR8L1P-201ENST00000534005 955 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AGGF1P8-201ENST00000562979 1000 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC012146.2-201ENST00000576545 416 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC008507.2-201ENST00000588402 1176 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC011445.2-201ENST00000599274 173 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms