Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 Z93242.1-201ENST00000427102 353 ntBASIC5.65□□□□□ -1.5
YBX1P67809 HMGB3P10-201ENST00000434734 572 ntBASIC5.65□□□□□ -1.5
YBX1P67809 ARPC3P1-201ENST00000437218 533 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AL451074.3-201ENST00000437709 472 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC004129.2-201ENST00000457229 287 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC110749.1-201ENST00000462007 357 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 RN7SL177P-201ENST00000476596 299 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.65□□□□□ -1.5
YBX1P67809 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 AC138866.2-201ENST00000508650 584 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.65□□□□□ -1.5
YBX1P67809 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 MTCO2P4-201ENST00000517968 247 ntBASIC5.65□□□□□ -1.5
YBX1P67809 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 AP001893.2-201ENST00000526949 202 ntBASIC5.65□□□□□ -1.5
YBX1P67809 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 AC125611.2-201ENST00000551907 647 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.65□□□□□ -1.5
YBX1P67809 HMGB1P33-201ENST00000563485 527 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC092121.1-201ENST00000569452 202 ntBASIC5.65□□□□□ -1.5
YBX1P67809 KPNA2P3-201ENST00000584190 848 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC060780.2-201ENST00000589047 198 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC005498.1-201ENST00000592125 465 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC145423.1-201ENST00000605712 336 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.65□□□□□ -1.5
YBX1P67809 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 AL096712.1-201ENST00000614561 159 ntBASIC5.65□□□□□ -1.5
YBX1P67809 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 AC019278.1-201ENST00000623516 479 ntBASIC5.65□□□□□ -1.5
YBX1P67809 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.65□□□□□ -1.5
YBX1P67809 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.65□□□□□ -1.5
YBX1P67809 CRYM-AS1-204ENST00000637983 556 ntBASIC5.65□□□□□ -1.5
YBX1P67809 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YBX1P67809 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
YBX1P67809 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YBX1P67809 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.51
YBX1P67809 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.65□□□□□ -1.51
YBX1P67809 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
YBX1P67809 AL031985.3-201ENST00000565390 2449 ntBASIC5.65□□□□□ -1.51
YBX1P67809 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YBX1P67809 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.51
YBX1P67809 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YBX1P67809 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 AC130360.2-201ENST00000533477 1556 ntBASIC5.64□□□□□ -1.51
YBX1P67809 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
YBX1P67809 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
YBX1P67809 RN7SKP81-201ENST00000365603 331 ntBASIC5.64□□□□□ -1.51
YBX1P67809 MIR217-201ENST00000384817 110 ntBASIC5.64□□□□□ -1.51
YBX1P67809 SNORA11C-201ENST00000408532 129 ntBASIC5.64□□□□□ -1.51
YBX1P67809 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.64□□□□□ -1.51
YBX1P67809 USP9YP27-201ENST00000418455 438 ntBASIC5.64□□□□□ -1.51
YBX1P67809 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 AL356583.2-201ENST00000426536 280 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.64□□□□□ -1.51
YBX1P67809 AP001324.1-201ENST00000428553 399 ntBASIC5.64□□□□□ -1.51
YBX1P67809 SKP1P3-201ENST00000429280 487 ntBASIC5.64□□□□□ -1.51
YBX1P67809 VDAC1P6-201ENST00000430062 855 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 CYCSP11-201ENST00000436426 315 ntBASIC5.64□□□□□ -1.51
YBX1P67809 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 RPS23P9-201ENST00000448848 438 ntBASIC5.64□□□□□ -1.51
YBX1P67809 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 PMCHL2-203ENST00000457791 237 ntBASIC5.64□□□□□ -1.51
YBX1P67809 RPL7P38-201ENST00000488396 739 ntBASIC5.64□□□□□ -1.51
YBX1P67809 RPS4XP14-201ENST00000493072 781 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AC108078.3-201ENST00000502633 489 ntBASIC5.64□□□□□ -1.51
YBX1P67809 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.64□□□□□ -1.51
YBX1P67809 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 RNU6-1004P-201ENST00000516584 111 ntBASIC5.64□□□□□ -1.51
YBX1P67809 SNORA18.6-201ENST00000516792 115 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 MTND1P35-201ENST00000526739 508 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms