Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CDRT1-208ENST00000630868 794 ntBASIC4.69□□□□□ -1.66
CLDN2P57739 ATE1-AS1-202ENST00000636460 506 ntBASIC4.69□□□□□ -1.66
CLDN2P57739 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN2P57739 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 TTC39DP-201ENST00000416781 1688 ntBASIC4.69□□□□□ -1.66
CLDN2P57739 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN2P57739 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 AC139713.2-214ENST00000642059 1811 ntBASIC4.69□□□□□ -1.66
CLDN2P57739 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLDN2P57739 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN2P57739 AL031595.2-201ENST00000624215 19071 ntBASIC4.69□□□□□ -1.66
CLDN2P57739 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN2P57739 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 RNU4-28P-201ENST00000364739 141 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 SNORA62-201ENST00000365493 153 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 Y_RNA.472-201ENST00000384322 102 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 SNORA51.12-201ENST00000384448 134 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 RNU6-636P-201ENST00000384598 107 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 TAS2R15P-201ENST00000390674 928 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 U3.23-201ENST00000391132 200 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 FABP12P1-201ENST00000401911 322 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 GSTM3P2-201ENST00000412746 530 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 RPL22P18-201ENST00000417197 377 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AC140479.3-201ENST00000418944 1126 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC092809.1-201ENST00000441469 474 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN2P57739 AL591719.1-201ENST00000444669 744 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 MTND2P28-201ENST00000457540 1044 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 RPL23AP44-201ENST00000482216 473 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 AC013356.1-201ENST00000489027 564 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN2P57739 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC105031.1-201ENST00000518550 476 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 HMGB1P23-201ENST00000518743 568 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN2P57739 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN2P57739 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 NTAN1P1-201ENST00000603150 646 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AC099676.1-201ENST00000608886 657 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AC243654.2-201ENST00000612843 443 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AL353726.1-201ENST00000614041 1000 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 AC083809.1-201ENST00000615051 472 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN2P57739 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLDN2P57739 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLDN2P57739 AC022031.1-201ENST00000585985 2593 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CLDN2P57739 OR9K1P-202ENST00000641111 3217 ntBASIC4.68□□□□□ -1.66
CLDN2P57739 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN2P57739 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN2P57739 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN2P57739 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN2P57739 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN2P57739 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN2P57739 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN2P57739 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN2P57739 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN2P57739 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 RNU4-92P-201ENST00000363783 136 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 MIR513B-201ENST00000385136 84 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 MTCO2P31-201ENST00000402702 684 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 AL079342.2-201ENST00000403367 482 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLDN2P57739 HMGB1P49-201ENST00000418882 569 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN2P57739 OR2X1P-201ENST00000421144 687 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN2P57739 RPS27AP7-201ENST00000422792 455 ntBASIC4.67□□□□□ -1.66
CLDN2P57739 HIGD1AP12-201ENST00000427832 281 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms