Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR4509-1-201ENST00000618224 94 ntBASIC4.96□□□□□ -1.62
HDAC4P56524 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.96□□□□□ -1.62
HDAC4P56524 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HDAC4P56524 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HDAC4P56524 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 SALL4P2-201ENST00000423288 2910 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 MTND4P26-201ENST00000415971 1359 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 RNU5B-1-201ENST00000363286 116 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 RNU6-317P-201ENST00000384031 107 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HDAC4P56524 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HDAC4P56524 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL590762.2-201ENST00000395798 571 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 RPL23AP59-201ENST00000399415 461 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 HSPD1P16-201ENST00000402302 394 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL592291.1-201ENST00000403830 352 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 SNORA11-201ENST00000408789 128 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 GSTM3P2-201ENST00000412746 530 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 TCEA1P4-201ENST00000415066 844 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.95□□□□□ -1.62
HDAC4P56524 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 GTF2IP2-201ENST00000424290 697 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC009965.2-201ENST00000425328 970 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC104837.2-201ENST00000427236 424 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 NMNAT1P2-201ENST00000435192 860 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 FTH1P16-201ENST00000435241 552 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 CEACAMP9-201ENST00000442990 513 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL672167.3-201ENST00000465951 960 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 RPS3AP6-201ENST00000484430 795 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.95□□□□□ -1.62
HDAC4P56524 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 PCNPP1-201ENST00000552501 511 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.95□□□□□ -1.62
HDAC4P56524 MIR3667-201ENST00000581025 74 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.95□□□□□ -1.62
HDAC4P56524 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 MTCO2P2-201ENST00000591258 225 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.95□□□□□ -1.62
HDAC4P56524 VN1R84P-201ENST00000593697 235 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 ZNF92P3-201ENST00000596594 954 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.95□□□□□ -1.62
HDAC4P56524 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 AL160237.3-201ENST00000604114 1013 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 AC006946.3-201ENST00000609791 756 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC096586.1-201ENST00000610267 561 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AP000770.2-201ENST00000623694 100 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC116563.2-201ENST00000624751 535 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.95□□□□□ -1.62
HDAC4P56524 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.95□□□□□ -1.62
HDAC4P56524 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.95□□□□□ -1.62
HDAC4P56524 AL451142.2-201ENST00000429076 2090 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 AL445487.1-201ENST00000415694 1580 ntBASIC4.95□□□□□ -1.62
HDAC4P56524 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HDAC4P56524 AL442639.1-201ENST00000625030 1899 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 AL359922.3-201ENST00000624779 1670 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 U6.112-201ENST00000384129 70 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 RNU6-932P-201ENST00000391108 106 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AP000580.1-201ENST00000404439 358 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 RN7SKP100-201ENST00000411258 284 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 NPM1P24-201ENST00000428039 894 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 NRBF2P3-201ENST00000432731 865 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 RPL7P29-201ENST00000437151 728 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 TPTE2P3-201ENST00000441562 1189 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC073648.4-201ENST00000442655 781 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 Z80107.2-201ENST00000445127 392 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 TDGF1P1-201ENST00000445734 527 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 AC079168.2-201ENST00000453977 416 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 RNU6-276P-201ENST00000516114 96 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 RNU1-6P-201ENST00000516290 144 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms