Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC000123.3-201ENST00000624029 4975 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
CMC4P56277 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 AL672167.1-205ENST00000641112 3080 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CMC4P56277 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
CMC4P56277 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 AC067945.1-201ENST00000342609 618 ntBASIC3.16□□□□□ -1.9
CMC4P56277 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 U3.22-201ENST00000391120 215 ntBASIC3.16□□□□□ -1.9
CMC4P56277 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 AC097374.1-203ENST00000400783 485 ntBASIC3.16□□□□□ -1.9
CMC4P56277 RNA5SP36-201ENST00000410197 133 ntBASIC3.16□□□□□ -1.9
CMC4P56277 OR13Z1P-201ENST00000416141 834 ntBASIC3.16□□□□□ -1.9
CMC4P56277 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.16□□□□□ -1.9
CMC4P56277 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.16□□□□□ -1.9
CMC4P56277 AC009965.2-201ENST00000425328 970 ntBASIC3.16□□□□□ -1.9
CMC4P56277 DYNLL1P7-201ENST00000429273 258 ntBASIC3.16□□□□□ -1.9
CMC4P56277 FTH1P16-201ENST00000435241 552 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.16□□□□□ -1.9
CMC4P56277 RPL23AP52-201ENST00000439311 478 ntBASIC3.16□□□□□ -1.9
CMC4P56277 HMGB3P9-201ENST00000441799 583 ntBASIC3.16□□□□□ -1.9
CMC4P56277 RPL34P26-201ENST00000445636 354 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC239809.1-201ENST00000450470 217 ntBASIC3.16□□□□□ -1.9
CMC4P56277 HMGB1P5-202ENST00000451497 985 ntBASIC3.16□□□□□ -1.9
CMC4P56277 RPL36AP13-201ENST00000457490 317 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC105137.1-201ENST00000484355 562 ntBASIC3.16□□□□□ -1.9
CMC4P56277 DEFB109F-201ENST00000491870 277 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC017037.1-201ENST00000508460 471 ntBASIC3.16□□□□□ -1.9
CMC4P56277 HPRT1P1-201ENST00000509498 657 ntBASIC3.16□□□□□ -1.9
CMC4P56277 PPBPP1-201ENST00000510807 373 ntBASIC3.16□□□□□ -1.9
CMC4P56277 NPM1P6-201ENST00000521088 871 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AP003730.1-201ENST00000524605 285 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.16□□□□□ -1.9
CMC4P56277 OR5M7P-201ENST00000526140 972 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC068831.4-201ENST00000556118 109 ntBASIC3.16□□□□□ -1.9
CMC4P56277 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.16□□□□□ -1.9
CMC4P56277 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.16□□□□□ -1.9
CMC4P56277 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CMC4P56277 ABI1P1-201ENST00000603375 1120 ntBASIC3.16□□□□□ -1.9
CMC4P56277 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.16□□□□□ -1.9
CMC4P56277 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.16□□□□□ -1.9
CMC4P56277 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 AC011944.2-201ENST00000624440 683 ntBASIC3.16□□□□□ -1.9
CMC4P56277 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.16□□□□□ -1.9
CMC4P56277 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMC4P56277 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.16□□□□□ -1.9
CMC4P56277 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CMC4P56277 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CMC4P56277 AC097504.1-201ENST00000515103 2415 ntBASIC3.15□□□□□ -1.9
CMC4P56277 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CMC4P56277 NOL8P1-201ENST00000508336 3529 ntBASIC3.15□□□□□ -1.9
CMC4P56277 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.15□□□□□ -1.9
CMC4P56277 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.15□□□□□ -1.9
CMC4P56277 AL049555.1-201ENST00000562834 1933 ntBASIC3.15□□□□□ -1.9
CMC4P56277 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CMC4P56277 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.15□□□□□ -1.9
CMC4P56277 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.15□□□□□ -1.91
CMC4P56277 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CMC4P56277 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CMC4P56277 RNU1-132P-201ENST00000364300 164 ntBASIC3.15□□□□□ -1.91
CMC4P56277 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 AC105402.1-201ENST00000413336 545 ntBASIC3.15□□□□□ -1.91
CMC4P56277 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 MTND4P11-201ENST00000417020 1058 ntBASIC3.15□□□□□ -1.91
CMC4P56277 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 RPS3AP54-201ENST00000435535 734 ntBASIC3.15□□□□□ -1.91
CMC4P56277 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CMC4P56277 AC114878.1-201ENST00000441166 358 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.15□□□□□ -1.91
CMC4P56277 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 GEMIN8P3-201ENST00000445417 720 ntBASIC3.15□□□□□ -1.91
CMC4P56277 NUTF2P3-201ENST00000448540 384 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.15□□□□□ -1.91
CMC4P56277 HMGB3P21-201ENST00000452483 547 ntBASIC3.15□□□□□ -1.91
CMC4P56277 RPL38P1-201ENST00000460914 211 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AP000942.1-201ENST00000463969 747 ntBASIC3.15□□□□□ -1.91
CMC4P56277 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 AC104164.2-201ENST00000496953 495 ntBASIC3.15□□□□□ -1.91
CMC4P56277 RNA5SP464-201ENST00000516251 108 ntBASIC3.15□□□□□ -1.91
CMC4P56277 MIR2116-201ENST00000517221 80 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC105233.3-201ENST00000531125 744 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.15□□□□□ -1.91
CMC4P56277 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CMC4P56277 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.15□□□□□ -1.91
CMC4P56277 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CMC4P56277 PARP1P2-201ENST00000556806 195 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AL109741.3-201ENST00000561748 592 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms