Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL512646.1-201ENST00000269395 1077 ntBASIC4.48□□□□□ -1.69
CDH13P55290 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 RNU6-77P-201ENST00000410554 91 ntBASIC4.48□□□□□ -1.69
CDH13P55290 RN7SKP167-201ENST00000411047 285 ntBASIC4.48□□□□□ -1.69
CDH13P55290 LIPT1P1-201ENST00000415870 1186 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC140479.3-201ENST00000418944 1126 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH13P55290 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH13P55290 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 ISCUP1-201ENST00000454451 448 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC026348.1-201ENST00000462549 1053 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC063943.1-201ENST00000465434 453 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC104689.1-201ENST00000473356 768 ntBASIC4.48□□□□□ -1.69
CDH13P55290 RPL7P16-201ENST00000479738 738 ntBASIC4.48□□□□□ -1.69
CDH13P55290 SUMO2P5-201ENST00000506790 245 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH13P55290 AC119751.1-201ENST00000513357 765 ntBASIC4.48□□□□□ -1.69
CDH13P55290 RNU2-30P-201ENST00000516209 141 ntBASIC4.48□□□□□ -1.69
CDH13P55290 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH13P55290 AC138701.1-201ENST00000524329 714 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC022882.1-201ENST00000532142 501 ntBASIC4.48□□□□□ -1.69
CDH13P55290 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH13P55290 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH13P55290 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH13P55290 NF1P5-201ENST00000588287 448 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC011458.1-201ENST00000604034 617 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC090948.2-201ENST00000607363 564 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC104763.3-201ENST00000613765 618 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC016769.4-201ENST00000616893 535 ntBASIC4.48□□□□□ -1.69
CDH13P55290 AC090772.4-201ENST00000623599 362 ntBASIC4.48□□□□□ -1.69
CDH13P55290 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH13P55290 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH13P55290 AL645568.2-201ENST00000432815 1337 ntBASIC4.47□□□□□ -1.69
CDH13P55290 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 ASNSP1-201ENST00000518311 1939 ntBASIC4.47□□□□□ -1.69
CDH13P55290 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH13P55290 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH13P55290 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 RPS24P12-201ENST00000402084 394 ntBASIC4.47□□□□□ -1.69
CDH13P55290 RPL7P27-201ENST00000403775 720 ntBASIC4.47□□□□□ -1.69
CDH13P55290 RSL24D1P1-201ENST00000404972 493 ntBASIC4.47□□□□□ -1.69
CDH13P55290 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH13P55290 COX6B1P1-201ENST00000415962 213 ntBASIC4.47□□□□□ -1.69
CDH13P55290 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH13P55290 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH13P55290 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 RPL7P4-203ENST00000430239 730 ntBASIC4.47□□□□□ -1.69
CDH13P55290 RPL12P28-201ENST00000430852 489 ntBASIC4.47□□□□□ -1.69
CDH13P55290 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH13P55290 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH13P55290 PTMAP3-201ENST00000447474 330 ntBASIC4.47□□□□□ -1.69
CDH13P55290 MRPL35P4-201ENST00000453682 566 ntBASIC4.47□□□□□ -1.69
CDH13P55290 RPL7P32-201ENST00000457119 744 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AC010683.1-201ENST00000473673 378 ntBASIC4.47□□□□□ -1.69
CDH13P55290 RPL36AP41-201ENST00000493820 306 ntBASIC4.47□□□□□ -1.69
CDH13P55290 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH13P55290 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH13P55290 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AC118942.1-201ENST00000529674 1035 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH13P55290 SLC25A36P1-201ENST00000590111 465 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH13P55290 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AL121594.5-201ENST00000631724 573 ntBASIC4.47□□□□□ -1.69
CDH13P55290 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH13P55290 AC139713.2-210ENST00000641741 992 ntBASIC4.47□□□□□ -1.69
CDH13P55290 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
CDH13P55290 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDH13P55290 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH13P55290 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CDH13P55290 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.46□□□□□ -1.69
CDH13P55290 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CDH13P55290 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 MIR122-201ENST00000385044 85 ntBASIC4.46□□□□□ -1.7
CDH13P55290 RNU6-298P-201ENST00000390888 96 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms