Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 AC016588.2-201ENST00000632484 3021 ntBASIC4.29□□□□□ -1.72
CDH6P55285 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 CYP1D1P-201ENST00000416662 1433 ntBASIC4.29□□□□□ -1.72
CDH6P55285 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH6P55285 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 CCT8P1-201ENST00000413611 1657 ntBASIC4.29□□□□□ -1.72
CDH6P55285 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
CDH6P55285 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 AC116667.1-201ENST00000604855 2072 ntBASIC4.28□□□□□ -1.72
CDH6P55285 OR11H5P-202ENST00000641612 1325 ntBASIC4.28□□□□□ -1.72
CDH6P55285 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH6P55285 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
CDH6P55285 RNU4-23P-201ENST00000362839 140 ntBASIC4.28□□□□□ -1.72
CDH6P55285 RNA5SP513-201ENST00000364648 118 ntBASIC4.28□□□□□ -1.72
CDH6P55285 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 MIR93-201ENST00000385024 80 ntBASIC4.28□□□□□ -1.72
CDH6P55285 MIR320B1-201ENST00000390209 79 ntBASIC4.28□□□□□ -1.72
CDH6P55285 OR6C69P-201ENST00000394268 893 ntBASIC4.28□□□□□ -1.72
CDH6P55285 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH6P55285 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 AC016397.1-201ENST00000412463 242 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 RPS6P12-201ENST00000432491 726 ntBASIC4.28□□□□□ -1.72
CDH6P55285 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 ELOCP8-201ENST00000439309 332 ntBASIC4.28□□□□□ -1.72
CDH6P55285 ELOCP15-201ENST00000442090 332 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC006011.1-201ENST00000442758 349 ntBASIC4.28□□□□□ -1.72
CDH6P55285 H2AFZP6-201ENST00000444403 394 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH6P55285 SEPT14P1-201ENST00000458703 648 ntBASIC4.28□□□□□ -1.72
CDH6P55285 KRT19P6-201ENST00000510983 209 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC067904.2-201ENST00000517322 1283 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC090281.1-201ENST00000523019 276 ntBASIC4.28□□□□□ -1.72
CDH6P55285 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 AC007599.1-201ENST00000568688 1174 ntBASIC4.28□□□□□ -1.72
CDH6P55285 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 AF230666.2-201ENST00000602328 725 ntBASIC4.28□□□□□ -1.72
CDH6P55285 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CDH6P55285 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDH6P55285 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDH6P55285 AC134882.1-201ENST00000603738 1676 ntBASIC4.28□□□□□ -1.72
CDH6P55285 PNPT1P2-201ENST00000456768 2050 ntBASIC4.28□□□□□ -1.72
CDH6P55285 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH6P55285 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.73
CDH6P55285 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH6P55285 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH6P55285 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CDH6P55285 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
CDH6P55285 GCNT6-201ENST00000379591 934 ntBASIC4.27□□□□□ -1.73
CDH6P55285 RNU6-532P-201ENST00000384318 107 ntBASIC4.27□□□□□ -1.73
CDH6P55285 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH6P55285 TRGV6-201ENST00000417928 299 ntBASIC4.27□□□□□ -1.73
CDH6P55285 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH6P55285 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH6P55285 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH6P55285 CHIAP3-201ENST00000423668 1133 ntBASIC4.27□□□□□ -1.73
CDH6P55285 HMGB1P32-201ENST00000425971 565 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AC016712.1-201ENST00000431088 378 ntBASIC4.27□□□□□ -1.73
CDH6P55285 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH6P55285 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH6P55285 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH6P55285 AC018797.3-201ENST00000513388 1241 ntBASIC4.27□□□□□ -1.73
CDH6P55285 RNU7-143P-201ENST00000516781 65 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH6P55285 OR7E10P-201ENST00000526420 991 ntBASIC4.27□□□□□ -1.73
CDH6P55285 EIF1AXP2-201ENST00000555940 413 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AC079171.1-201ENST00000568788 914 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AC012417.1-201ENST00000582307 1039 ntBASIC4.27□□□□□ -1.73
CDH6P55285 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
CDH6P55285 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH6P55285 AL451044.1-201ENST00000604867 238 ntBASIC4.27□□□□□ -1.73
CDH6P55285 OR6R2P-201ENST00000609216 300 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AC026368.1-201ENST00000614934 690 ntBASIC4.27□□□□□ -1.73
CDH6P55285 MIR8059-201ENST00000620427 81 ntBASIC4.27□□□□□ -1.73
CDH6P55285 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH6P55285 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH6P55285 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH6P55285 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDH6P55285 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDH6P55285 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
CDH6P55285 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms