Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 AC019155.1-201ENST00000382242 574 ntBASIC8.16□□□□□ -1.1
ATN1P54259 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
ATN1P54259 AL356421.1-201ENST00000403255 413 ntBASIC8.16□□□□□ -1.1
ATN1P54259 AL024474.1-201ENST00000404655 591 ntBASIC8.16□□□□□ -1.1
ATN1P54259 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.16□□□□□ -1.1
ATN1P54259 DDX10P2-201ENST00000417796 2614 ntBASIC8.16□□□□□ -1.1
ATN1P54259 BX842559.1-201ENST00000419615 532 ntBASIC8.16□□□□□ -1.1
ATN1P54259 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC8.16□□□□□ -1.1
ATN1P54259 RPL3P11-201ENST00000434028 1146 ntBASIC8.16□□□□□ -1.1
ATN1P54259 AC099670.1-201ENST00000455141 783 ntBASIC8.16□□□□□ -1.1
ATN1P54259 HMGB1P4-201ENST00000455362 567 ntBASIC8.16□□□□□ -1.1
ATN1P54259 RPL21P71-201ENST00000465598 459 ntBASIC8.16□□□□□ -1.1
ATN1P54259 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.16□□□□□ -1.1
ATN1P54259 TBCAP3-201ENST00000512475 312 ntBASIC8.16□□□□□ -1.1
ATN1P54259 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 RNU6-911P-201ENST00000516523 104 ntBASIC8.16□□□□□ -1.1
ATN1P54259 IGKV2-29-201ENST00000521304 372 ntBASIC8.16□□□□□ -1.1
ATN1P54259 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC8.16□□□□□ -1.1
ATN1P54259 AC125612.1-201ENST00000547580 377 ntBASIC8.16□□□□□ -1.1
ATN1P54259 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC8.16□□□□□ -1.1
ATN1P54259 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.16□□□□□ -1.1
ATN1P54259 AC012175.1-201ENST00000603755 531 ntBASIC8.16□□□□□ -1.1
ATN1P54259 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 AC006023.2-201ENST00000609916 167 ntBASIC8.16□□□□□ -1.1
ATN1P54259 U6.101-201ENST00000637707 76 ntBASIC8.16□□□□□ -1.1
ATN1P54259 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
ATN1P54259 AC016251.1-201ENST00000624299 4198 ntBASIC8.16□□□□□ -1.1
ATN1P54259 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATN1P54259 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
ATN1P54259 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
ATN1P54259 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.16□□□□□ -1.1
ATN1P54259 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.16□□□□□ -1.1
ATN1P54259 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.15□□□□□ -1.1
ATN1P54259 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 AC069222.1-201ENST00000608028 3360 ntBASIC8.15□□□□□ -1.1
ATN1P54259 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
ATN1P54259 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 RNY4P28-201ENST00000365281 93 ntBASIC8.15□□□□□ -1.1
ATN1P54259 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
ATN1P54259 MT-TP-201ENST00000387461 68 ntBASIC8.15□□□□□ -1.1
ATN1P54259 SNORD115-46-201ENST00000390982 71 ntBASIC8.15□□□□□ -1.1
ATN1P54259 RNA5SP280-201ENST00000411230 115 ntBASIC8.15□□□□□ -1.1
ATN1P54259 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 AL353754.1-201ENST00000440219 340 ntBASIC8.15□□□□□ -1.1
ATN1P54259 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 RPL23AP31-201ENST00000456160 467 ntBASIC8.15□□□□□ -1.1
ATN1P54259 RN7SL809P-201ENST00000482040 297 ntBASIC8.15□□□□□ -1.1
ATN1P54259 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 AC110792.1-201ENST00000491826 472 ntBASIC8.15□□□□□ -1.1
ATN1P54259 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 AC036111.2-201ENST00000533247 901 ntBASIC8.15□□□□□ -1.1
ATN1P54259 APAF1-207ENST00000547743 651 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.15□□□□□ -1.1
ATN1P54259 MRPS5P4-201ENST00000592830 325 ntBASIC8.15□□□□□ -1.1
ATN1P54259 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.15□□□□□ -1.1
ATN1P54259 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.15□□□□□ -1.1
ATN1P54259 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.15□□□□□ -1.1
ATN1P54259 U2.17-201ENST00000611454 95 ntBASIC8.15□□□□□ -1.1
ATN1P54259 MIR7109-201ENST00000613748 65 ntBASIC8.15□□□□□ -1.1
ATN1P54259 AL118522.2-201ENST00000616045 615 ntBASIC8.15□□□□□ -1.1
ATN1P54259 AL591926.4-201ENST00000616895 298 ntBASIC8.15□□□□□ -1.1
ATN1P54259 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.15□□□□□ -1.1
ATN1P54259 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 AC025034.2-201ENST00000623264 286 ntBASIC8.15□□□□□ -1.1
ATN1P54259 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATN1P54259 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
ATN1P54259 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.15□□□□□ -1.11
ATN1P54259 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.15□□□□□ -1.11
ATN1P54259 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
ATN1P54259 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ATN1P54259 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ATN1P54259 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ATN1P54259 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ATN1P54259 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.15□□□□□ -1.11
ATN1P54259 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms