Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC107021.2-201ENST00000567714 2095 ntBASIC3.88□□□□□ -1.79
HCFC1P51610 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCFC1P51610 AL136164.3-201ENST00000624429 3978 ntBASIC3.88□□□□□ -1.79
HCFC1P51610 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HCFC1P51610 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.88□□□□□ -1.79
HCFC1P51610 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HCFC1P51610 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.88□□□□□ -1.79
HCFC1P51610 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HCFC1P51610 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 AC097374.1-203ENST00000400783 485 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 PPIAP31-201ENST00000405422 495 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AL139095.3-201ENST00000419672 1203 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 USP12PY-201ENST00000427677 1064 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 RPL5P13-201ENST00000462840 709 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.87□□□□□ -1.79
HCFC1P51610 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 AL049838.1-201ENST00000563647 981 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC130352.1-201ENST00000602979 661 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC245389.1-201ENST00000605141 529 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC020634.1-201ENST00000608701 549 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 TMEM30CP-203ENST00000637814 1035 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.87□□□□□ -1.79
HCFC1P51610 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HCFC1P51610 SMG1P4-204ENST00000523028 4131 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 BTBD10P1-201ENST00000549824 1352 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
HCFC1P51610 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 RNU6-481P-201ENST00000384194 107 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 RNU6-31P-201ENST00000384388 108 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL161909.1-201ENST00000397390 712 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.87□□□□□ -1.79
HCFC1P51610 CYP4F29P-201ENST00000420685 446 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 TDGF1P1-201ENST00000445734 527 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL157827.1-201ENST00000447622 132 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 RPS27AP17-201ENST00000463344 455 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC008379.1-201ENST00000463655 464 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC133963.2-201ENST00000513686 578 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC108064.1-201ENST00000513791 460 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC112198.4-201ENST00000515450 351 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 RNU5A-7P-201ENST00000515979 116 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.87□□□□□ -1.79
HCFC1P51610 CIR1P1-201ENST00000524055 1133 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCFC1P51610 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.87□□□□□ -1.79
HCFC1P51610 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 SLC25A36P1-201ENST00000590111 465 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.87□□□□□ -1.79
HCFC1P51610 AC124856.1-201ENST00000600819 896 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC099676.1-201ENST00000608886 657 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AL161637.1-201ENST00000622380 412 ntBASIC3.87□□□□□ -1.79
HCFC1P51610 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HCFC1P51610 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HCFC1P51610 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC1P51610 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.86□□□□□ -1.79
HCFC1P51610 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC1P51610 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC1P51610 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCFC1P51610 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.86□□□□□ -1.79
HCFC1P51610 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
HCFC1P51610 RNU2-17P-201ENST00000410290 190 ntBASIC3.86□□□□□ -1.79
HCFC1P51610 RN7SKP235-201ENST00000410662 305 ntBASIC3.86□□□□□ -1.79
HCFC1P51610 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.86□□□□□ -1.79
HCFC1P51610 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.86□□□□□ -1.79
HCFC1P51610 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.86□□□□□ -1.79
HCFC1P51610 RPL21P43-201ENST00000425440 472 ntBASIC3.86□□□□□ -1.79
HCFC1P51610 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HCFC1P51610 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.86□□□□□ -1.79
HCFC1P51610 AC073587.1-201ENST00000447093 876 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms