Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL35P6-201ENST00000490024 372 ntBASIC4.63□□□□□ -1.67
LHX1P48742 PPM1AP1-201ENST00000502740 1135 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AC111193.1-201ENST00000504097 155 ntBASIC4.63□□□□□ -1.67
LHX1P48742 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.63□□□□□ -1.67
LHX1P48742 TRAV8-5-201ENST00000537369 341 ntBASIC4.63□□□□□ -1.67
LHX1P48742 GLRXP2-201ENST00000555594 321 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.63□□□□□ -1.67
LHX1P48742 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.63□□□□□ -1.67
LHX1P48742 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 AC104072.1-201ENST00000568817 668 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.63□□□□□ -1.67
LHX1P48742 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LHX1P48742 AC005086.4-201ENST00000623065 213 ntBASIC4.63□□□□□ -1.67
LHX1P48742 MIR3653-201ENST00000625572 110 ntBASIC4.63□□□□□ -1.67
LHX1P48742 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.63□□□□□ -1.67
LHX1P48742 AL158163.1-201ENST00000603915 1649 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LHX1P48742 DDX18P4-201ENST00000511690 1966 ntBASIC4.62□□□□□ -1.67
LHX1P48742 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LHX1P48742 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 BMS1P3-201ENST00000372011 932 ntBASIC4.62□□□□□ -1.67
LHX1P48742 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 RNU6-481P-201ENST00000384194 107 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC136624.1-201ENST00000400791 413 ntBASIC4.62□□□□□ -1.67
LHX1P48742 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 AC008173.1-201ENST00000418901 264 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC091390.1-201ENST00000433904 331 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 SDR42E1P3-201ENST00000438345 502 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 AC008379.1-201ENST00000463655 464 ntBASIC4.62□□□□□ -1.67
LHX1P48742 PPIAP21-201ENST00000464473 501 ntBASIC4.62□□□□□ -1.67
LHX1P48742 UQCRHP4-201ENST00000471686 272 ntBASIC4.62□□□□□ -1.67
LHX1P48742 RPL21P47-201ENST00000483696 477 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC090013.1-201ENST00000485147 480 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC104687.1-201ENST00000485829 412 ntBASIC4.62□□□□□ -1.67
LHX1P48742 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.62□□□□□ -1.67
LHX1P48742 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 AC068339.2-201ENST00000534395 618 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC025260.1-201ENST00000548858 430 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AL352979.3-201ENST00000553515 247 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC068714.1-201ENST00000559623 800 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.62□□□□□ -1.67
LHX1P48742 MIR3939-201ENST00000582614 106 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 AL590392.1-201ENST00000604960 446 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC068880.4-201ENST00000623082 495 ntBASIC4.62□□□□□ -1.67
LHX1P48742 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LHX1P48742 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.62□□□□□ -1.67
LHX1P48742 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 HSPD1P11-201ENST00000508643 1702 ntBASIC4.62□□□□□ -1.67
LHX1P48742 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LHX1P48742 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LHX1P48742 AC009313.2-201ENST00000417893 1941 ntBASIC4.62□□□□□ -1.67
LHX1P48742 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LHX1P48742 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX1P48742 AC092079.1-201ENST00000558620 1985 ntBASIC4.62□□□□□ -1.67
LHX1P48742 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LHX1P48742 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX1P48742 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
LHX1P48742 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.61□□□□□ -1.67
LHX1P48742 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 METTL21EP-201ENST00000298105 713 ntBASIC4.61□□□□□ -1.67
LHX1P48742 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LHX1P48742 SNORD96B-201ENST00000386148 79 ntBASIC4.61□□□□□ -1.67
LHX1P48742 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 VDAC2P1-201ENST00000399358 958 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC097374.1-203ENST00000400783 485 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AP000357.1-201ENST00000409926 1165 ntBASIC4.61□□□□□ -1.67
LHX1P48742 RN7SKP247-201ENST00000411094 308 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AL445183.3-201ENST00000414168 502 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 UBTFL3-201ENST00000418934 1024 ntBASIC4.61□□□□□ -1.67
LHX1P48742 MRPL50P1-201ENST00000431951 384 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms