Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.93□□□□□ -1.62
RFC1P35251 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.93□□□□□ -1.62
RFC1P35251 AL359757.1-201ENST00000623176 255 ntBASIC4.93□□□□□ -1.62
RFC1P35251 AC114546.3-201ENST00000623582 1734 ntBASIC4.93□□□□□ -1.62
RFC1P35251 AC017104.5-201ENST00000637647 639 ntBASIC4.93□□□□□ -1.62
RFC1P35251 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC1P35251 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
RFC1P35251 ZFRP1-201ENST00000457579 2970 ntBASIC4.93□□□□□ -1.62
RFC1P35251 AL136164.3-201ENST00000624429 3978 ntBASIC4.93□□□□□ -1.62
RFC1P35251 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC1P35251 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC1P35251 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC1P35251 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 CCT8P1-201ENST00000413611 1657 ntBASIC4.92□□□□□ -1.62
RFC1P35251 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 Z95327.2-201ENST00000414579 1873 ntBASIC4.92□□□□□ -1.62
RFC1P35251 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
RFC1P35251 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RFC1P35251 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 AC019155.1-201ENST00000382242 574 ntBASIC4.92□□□□□ -1.62
RFC1P35251 RNU4-31P-201ENST00000384211 141 ntBASIC4.92□□□□□ -1.62
RFC1P35251 RNU6-452P-201ENST00000384406 107 ntBASIC4.92□□□□□ -1.62
RFC1P35251 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 FABP7P1-201ENST00000424004 391 ntBASIC4.92□□□□□ -1.62
RFC1P35251 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC104837.2-201ENST00000427236 424 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC092634.2-201ENST00000428146 1010 ntBASIC4.92□□□□□ -1.62
RFC1P35251 RPS27P18-201ENST00000431701 247 ntBASIC4.92□□□□□ -1.62
RFC1P35251 GTF2IP3-201ENST00000433887 494 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC008072.1-201ENST00000434254 824 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC1P35251 AC005154.2-201ENST00000438110 379 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC108463.1-201ENST00000450258 347 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AL445433.1-201ENST00000457507 257 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 MTCO2P6-201ENST00000463134 685 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC022795.1-201ENST00000473808 480 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC1P35251 DUXAP5-201ENST00000529668 529 ntBASIC4.92□□□□□ -1.62
RFC1P35251 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
RFC1P35251 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC079075.1-201ENST00000559543 878 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC105129.1-201ENST00000560250 297 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC1P35251 AC015912.2-201ENST00000571053 181 ntBASIC4.92□□□□□ -1.62
RFC1P35251 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC1P35251 RN7SL652P-201ENST00000577769 300 ntBASIC4.92□□□□□ -1.62
RFC1P35251 MIR4436B2-201ENST00000581415 91 ntBASIC4.92□□□□□ -1.62
RFC1P35251 MIR4436B1-201ENST00000583272 91 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.92□□□□□ -1.62
RFC1P35251 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 AL512782.1-201ENST00000603093 364 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AL391358.1-201ENST00000605342 190 ntBASIC4.92□□□□□ -1.62
RFC1P35251 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.92□□□□□ -1.62
RFC1P35251 AL355493.4-201ENST00000618530 292 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AP002791.1-201ENST00000623291 381 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC019226.2-201ENST00000625973 424 ntBASIC4.92□□□□□ -1.62
RFC1P35251 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 LINC01808-202ENST00000641680 1116 ntBASIC4.92□□□□□ -1.62
RFC1P35251 DDX18P4-201ENST00000511690 1966 ntBASIC4.92□□□□□ -1.62
RFC1P35251 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC1P35251 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFC1P35251 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC1P35251 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RFC1P35251 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFC1P35251 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RFC1P35251 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
RFC1P35251 AP001273.1-201ENST00000624493 3152 ntBASIC4.91□□□□□ -1.62
RFC1P35251 AC093311.1-201ENST00000506586 2021 ntBASIC4.91□□□□□ -1.62
RFC1P35251 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 RNU6-543P-201ENST00000362576 108 ntBASIC4.91□□□□□ -1.62
RFC1P35251 RNU6-236P-201ENST00000363886 106 ntBASIC4.91□□□□□ -1.62
RFC1P35251 RNU6-185P-201ENST00000384421 107 ntBASIC4.91□□□□□ -1.62
RFC1P35251 MIR550A3-201ENST00000390735 95 ntBASIC4.91□□□□□ -1.62
RFC1P35251 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFC1P35251 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms