Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.93□□□□□ -0.98
HOXD11P31277 RNU6-625P-201ENST00000459412 107 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 AP003385.3-201ENST00000472498 287 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 RN7SL862P-201ENST00000491550 298 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC8.93□□□□□ -0.98
HOXD11P31277 AC004980.4-201ENST00000513375 203 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 RNU6ATAC17P-201ENST00000516074 71 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC8.93□□□□□ -0.98
HOXD11P31277 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 AC004467.1-201ENST00000615678 330 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 AC105235.1-201ENST00000623208 1816 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 ZFP69-201ENST00000372705 2104 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
HOXD11P31277 AC009148.1-201ENST00000570148 2693 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 AC123769.1-201ENST00000530992 3192 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 ZNF829-203ENST00000520965 4977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 ADSL-208ENST00000623063 4359 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 MALAT1-202ENST00000534336 8708 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC8.92□□□□□ -0.98
HOXD11P31277 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 RNU6-1296P-201ENST00000383879 107 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 MIR1296-201ENST00000408136 92 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 FDPSP6-201ENST00000425091 512 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 RPS23P8-201ENST00000429775 330 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 AL604028.2-201ENST00000437848 788 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.92□□□□□ -0.98
HOXD11P31277 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC8.92□□□□□ -0.98
HOXD11P31277 AP003730.1-201ENST00000524605 285 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.92□□□□□ -0.98
HOXD11P31277 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC8.92□□□□□ -0.98
HOXD11P31277 AC091078.2-201ENST00000557145 559 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 RN7SL203P-201ENST00000579600 296 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 AC005323.1-202ENST00000581947 578 ntTSL 4 BASIC8.92□□□□□ -0.98
HOXD11P31277 AL357075.2-201ENST00000614906 189 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
HOXD11P31277 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
HOXD11P31277 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
HOXD11P31277 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
HOXD11P31277 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
HOXD11P31277 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.92□□□□□ -0.98
HOXD11P31277 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
HOXD11P31277 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HOXD11P31277 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 AL136164.4-201ENST00000625013 2135 ntBASIC8.92□□□□□ -0.98
HOXD11P31277 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC8.92□□□□□ -0.98
HOXD11P31277 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HOXD11P31277 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.91□□□□□ -0.98
HOXD11P31277 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
HOXD11P31277 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 RNU6-1082P-201ENST00000364574 107 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 RNU6-969P-201ENST00000383900 105 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 SNORA51.10-201ENST00000384418 136 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 MIR1302-5-201ENST00000408164 150 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 AL662791.3-201ENST00000413771 776 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 EIF1AXP1-201ENST00000419267 435 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 RPS27AP12-201ENST00000429552 465 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.91□□□□□ -0.98
HOXD11P31277 AP000532.1-201ENST00000440999 177 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 AC090804.1-201ENST00000448870 490 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.91□□□□□ -0.98
HOXD11P31277 GEMIN2P1-201ENST00000454246 752 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 CYP4A27P-201ENST00000567218 190 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC8.91□□□□□ -0.98
HOXD11P31277 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 AC132807.2-202ENST00000616960 339 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms