Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SNORA9-201ENST00000384215 133 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC068533.1-201ENST00000418542 415 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.09□□□□□ -1.43
CLIP1P30622 HMGN2P31-201ENST00000432430 273 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP1P30622 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP1P30622 PDSS1P2-201ENST00000449397 678 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC022695.1-201ENST00000522089 237 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 OR4A12P-201ENST00000530847 918 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP1P30622 AC090877.1-201ENST00000561418 344 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC244505.7-201ENST00000599675 272 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 SRGNP1-201ENST00000603392 451 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 AC012468.1-201ENST00000604888 430 ntBASIC6.09□□□□□ -1.43
CLIP1P30622 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP1P30622 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CLIP1P30622 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CLIP1P30622 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP1P30622 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP1P30622 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLIP1P30622 ZNF962P-201ENST00000443465 3140 ntBASIC6.09□□□□□ -1.44
CLIP1P30622 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
CLIP1P30622 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CLIP1P30622 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP1P30622 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 AL390879.2-203ENST00000426943 1121 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 KCTD9P3-201ENST00000434597 1169 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 AL451050.1-201ENST00000450126 415 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 MIR5187-201ENST00000583479 76 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC017100.2-201ENST00000584628 355 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 SNORA62.6-201ENST00000606322 83 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC007342.8-201ENST00000623278 678 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC138627.1-204ENST00000641894 765 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP1P30622 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLIP1P30622 ATP5F1P4-201ENST00000397288 746 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 SNORA3.3-201ENST00000408712 125 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.08□□□□□ -1.44
CLIP1P30622 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP1P30622 SEPT14P1-201ENST00000458703 648 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 IGKV2-23-201ENST00000518729 323 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP1P30622 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP1P30622 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.08□□□□□ -1.44
CLIP1P30622 AL390816.3-201ENST00000604527 1066 ntBASIC6.08□□□□□ -1.44
CLIP1P30622 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP1P30622 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.07□□□□□ -1.44
CLIP1P30622 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP1P30622 AL049781.1-201ENST00000623195 3585 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP1P30622 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP1P30622 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP1P30622 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLIP1P30622 RHOT1P2-201ENST00000366423 333 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 RPL7P60-201ENST00000397636 735 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 MTND2P15-201ENST00000418575 892 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 AC018635.1-201ENST00000468292 1030 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 SOD1P3-201ENST00000518682 454 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.07□□□□□ -1.44
CLIP1P30622 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.07□□□□□ -1.44
CLIP1P30622 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP1P30622 AL137849.1-201ENST00000604767 169 ntBASIC6.07□□□□□ -1.44
CLIP1P30622 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP1P30622 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.07□□□□□ -1.44
CLIP1P30622 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
CLIP1P30622 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP1P30622 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP1P30622 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.06□□□□□ -1.44
CLIP1P30622 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP1P30622 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP1P30622 SNORD3H-201ENST00000384486 214 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 MIR183-201ENST00000384958 110 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP1P30622 SNORA71B-202ENST00000439232 272 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 DSTNP2-201ENST00000504533 515 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 RNA5SP154-201ENST00000516193 111 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP1P30622 AP005262.1-201ENST00000582646 997 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 U3.45-201ENST00000607547 219 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 AC096577.2-201ENST00000611455 153 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 AL157762.1-201ENST00000619612 415 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP1P30622 AL596275.2-204ENST00000641628 552 ntBASIC6.06□□□□□ -1.44
CLIP1P30622 AL596275.2-206ENST00000641957 626 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms