Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC010133.1-201ENST00000615809 842 ntBASIC6.95□□□□□ -1.3
RXRBP28702 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.95□□□□□ -1.3
RXRBP28702 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RXRBP28702 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.95□□□□□ -1.3
RXRBP28702 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RXRBP28702 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RXRBP28702 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
RXRBP28702 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.95□□□□□ -1.3
RXRBP28702 AC108751.5-201ENST00000492880 1336 ntBASIC6.95□□□□□ -1.3
RXRBP28702 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.95□□□□□ -1.3
RXRBP28702 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RXRBP28702 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.95□□□□□ -1.3
RXRBP28702 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RXRBP28702 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.94□□□□□ -1.3
RXRBP28702 AC006600.2-201ENST00000624834 2506 ntBASIC6.94□□□□□ -1.3
RXRBP28702 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 AC008033.1-201ENST00000216407 1162 ntBASIC6.94□□□□□ -1.3
RXRBP28702 RNU6-500P-201ENST00000362349 107 ntBASIC6.94□□□□□ -1.3
RXRBP28702 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.94□□□□□ -1.3
RXRBP28702 MRPS36P1-201ENST00000421291 307 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC004448.2-201ENST00000422360 586 ntBASIC6.94□□□□□ -1.3
RXRBP28702 CYCSP46-201ENST00000423569 204 ntBASIC6.94□□□□□ -1.3
RXRBP28702 RPL12P34-201ENST00000424532 479 ntBASIC6.94□□□□□ -1.3
RXRBP28702 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.94□□□□□ -1.3
RXRBP28702 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.94□□□□□ -1.3
RXRBP28702 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 DNAJC19P4-201ENST00000440115 345 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC093155.1-201ENST00000440164 826 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AL050341.1-201ENST00000447743 313 ntBASIC6.94□□□□□ -1.3
RXRBP28702 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 NIP7P2-201ENST00000485801 544 ntBASIC6.94□□□□□ -1.3
RXRBP28702 MTCO2P30-201ENST00000503662 364 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 HMGB3P13-201ENST00000511263 607 ntBASIC6.94□□□□□ -1.3
RXRBP28702 HNRNPKP5-201ENST00000515300 253 ntBASIC6.94□□□□□ -1.3
RXRBP28702 PRELID3BP4-201ENST00000515476 571 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.94□□□□□ -1.3
RXRBP28702 AL163952.1-202ENST00000569625 600 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC090616.5-202ENST00000582111 297 ntBASIC6.94□□□□□ -1.3
RXRBP28702 EIF1P6-201ENST00000600054 334 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AL117336.2-201ENST00000602435 335 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC009994.1-201ENST00000606889 253 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC006566.1-201ENST00000608943 513 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AL159169.2-201ENST00000610061 1269 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AC090970.3-201ENST00000612566 866 ntBASIC6.94□□□□□ -1.3
RXRBP28702 AL359697.1-201ENST00000624879 587 ntBASIC6.94□□□□□ -1.3
RXRBP28702 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.94□□□□□ -1.3
RXRBP28702 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 AL353796.1-201ENST00000561542 3241 ntBASIC6.94□□□□□ -1.3
RXRBP28702 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
RXRBP28702 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RXRBP28702 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RXRBP28702 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RXRBP28702 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.93□□□□□ -1.3
RXRBP28702 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RXRBP28702 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 AC144833.1-201ENST00000567953 4089 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 RNU6-181P-201ENST00000363225 107 ntBASIC6.93□□□□□ -1.3
RXRBP28702 RNA5SP447-201ENST00000363749 119 ntBASIC6.93□□□□□ -1.3
RXRBP28702 snoZ40.1-201ENST00000364540 72 ntBASIC6.93□□□□□ -1.3
RXRBP28702 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 RNF10P1-201ENST00000418589 369 ntBASIC6.93□□□□□ -1.3
RXRBP28702 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 Z99497.1-201ENST00000421282 135 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 OR1H1P-201ENST00000448731 937 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 AC109327.1-201ENST00000471666 403 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC092754.1-201ENST00000472975 479 ntBASIC6.93□□□□□ -1.3
RXRBP28702 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 AC091959.2-201ENST00000477363 321 ntBASIC6.93□□□□□ -1.3
RXRBP28702 RN7SL319P-201ENST00000480656 221 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC104971.1-201ENST00000495117 578 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms