Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RPL6P29-201ENST00000414863 865 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC092647.1-201ENST00000420654 287 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 FABP3P2-201ENST00000453169 399 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL645939.1-201ENST00000453429 797 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL354710.1-201ENST00000453641 246 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 PPIAP21-201ENST00000464473 501 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC010618.1-201ENST00000469924 477 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC063950.1-201ENST00000552036 308 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMBP28068 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 HNRNPCP4-201ENST00000571636 900 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC136624.4-201ENST00000573044 370 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 SS18L2P2-201ENST00000583960 235 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL590392.1-201ENST00000604960 446 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC023043.4-201ENST00000612081 449 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 MIR6716-201ENST00000613413 80 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC008785.1-201ENST00000624475 456 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC016717.3-201ENST00000624730 554 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMBP28068 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMBP28068 CCT8P1-201ENST00000413611 1657 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 MAPK10-253ENST00000641010 4072 ntBASIC3.17□□□□□ -1.9
HLA-DMBP28068 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMBP28068 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMBP28068 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC026951.1-201ENST00000559530 2459 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC017007.4-201ENST00000503353 1352 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 MIR1179-201ENST00000408703 91 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 RSL24D1P6-201ENST00000426934 401 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 VDAC1P6-201ENST00000430062 855 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AL132765.1-201ENST00000434165 553 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 RPS3AP54-201ENST00000435535 734 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 IFNWP4-201ENST00000453148 294 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 RPL23AP81-201ENST00000455252 467 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 RPL23AP71-201ENST00000470966 469 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC092851.1-201ENST00000535964 478 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 PSMB7P1-201ENST00000556349 514 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC011477.5-201ENST00000586571 259 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC090953.1-201ENST00000604305 1092 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC092653.1-201ENST00000608509 531 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC114781.5-201ENST00000615297 108 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 AP000843.1-201ENST00000624880 701 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 OR52H1-202ENST00000641796 1061 ntBASIC3.16□□□□□ -1.9
HLA-DMBP28068 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMBP28068 AL592437.2-201ENST00000421655 2434 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms