Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU1-136P-201ENST00000384181 164 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RNA5SP187-201ENST00000384400 119 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 SNORA70E-201ENST00000384492 135 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 MIR551A-201ENST00000385042 96 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 EIF5P1-201ENST00000400019 1231 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 PIGPP2-201ENST00000411569 458 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 CYCSP10-201ENST00000417973 294 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AL121878.1-201ENST00000418638 859 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 USP9YP26-201ENST00000421008 661 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC092651.1-201ENST00000426110 312 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC104843.2-201ENST00000427666 297 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 TXNL1P1-201ENST00000429528 554 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC242426.1-201ENST00000435270 960 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RPL23AP74-201ENST00000437246 471 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 EEF1B2P6-201ENST00000445713 673 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF4P23510 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 OR52J1P-201ENST00000450596 932 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC016724.1-201ENST00000453215 421 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 RPL12P39-201ENST00000455456 496 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 SETP20-201ENST00000457046 852 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC026410.2-201ENST00000460281 156 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RPS23P6-201ENST00000466136 431 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 BZW1P2-201ENST00000473537 826 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF4P23510 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF4P23510 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC006499.2-201ENST00000513470 337 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RNA5SP216-201ENST00000516111 123 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RN7SKP253-201ENST00000516424 309 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 MRPS16P1-201ENST00000523462 412 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC239860.2-201ENST00000525886 270 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC022404.1-201ENST00000555320 273 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 CYCSP2-201ENST00000558168 301 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
TNFSF4P23510 MIR4505-201ENST00000582238 73 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC104785.1-201ENST00000603220 588 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 YWHAQP7-201ENST00000603536 658 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AL009028.1-201ENST00000604895 802 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC004223.4-201ENST00000612426 332 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RN7SL787P-201ENST00000613000 284 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC010608.2-201ENST00000624830 470 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AL359955.1-201ENST00000455242 3275 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF4P23510 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC114786.1-201ENST00000512892 1415 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 AC090229.1-201ENST00000590983 1609 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
TNFSF4P23510 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 Y_RNA.18-201ENST00000362461 102 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 ARF4P3-201ENST00000397387 509 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 HMGB1P17-201ENST00000403495 628 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFSF4P23510 RN7SKP279-201ENST00000411383 298 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 RN7SKP293-201ENST00000411389 296 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 RPS15AP38-201ENST00000413110 372 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AL049610.1-201ENST00000423374 372 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 RPL7P22-201ENST00000466005 733 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 GLUD1P3-202ENST00000508551 200 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TNFSF4P23510 Y_RNA.688-201ENST00000516565 95 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 RN7SKP99-201ENST00000517028 307 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 IGLVIV-53-201ENST00000520107 367 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 NRBF2P4-201ENST00000520874 850 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms