Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MIR7155-201ENST00000615925 56 ntBASIC4.28□□□□□ -1.72
HLA-DOBP13765 CR381572.2-201ENST00000624852 397 ntBASIC4.28□□□□□ -1.72
HLA-DOBP13765 AC017037.3-201ENST00000625016 472 ntBASIC4.28□□□□□ -1.72
HLA-DOBP13765 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DOBP13765 MIR1322-201ENST00000638013 71 ntBASIC4.28□□□□□ -1.72
HLA-DOBP13765 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DOBP13765 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DOBP13765 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DOBP13765 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DOBP13765 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DOBP13765 AL672167.1-203ENST00000641299 2975 ntBASIC4.28□□□□□ -1.72
HLA-DOBP13765 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DOBP13765 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
HLA-DOBP13765 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 NCLP2-201ENST00000416078 1462 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC107068.1-201ENST00000563286 4218 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 NACA3P-201ENST00000359690 648 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 SNORD116-2-201ENST00000384274 95 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 SNORD116-6-201ENST00000384711 96 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 MIR105-2-201ENST00000385083 81 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC005522.1-201ENST00000395416 346 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL592291.1-201ENST00000403830 352 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL590084.1-201ENST00000407885 387 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 SNORA11C-201ENST00000408532 129 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 RNU6-77P-201ENST00000410554 91 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 GNG5P5-201ENST00000420444 220 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 SEPT7P3-201ENST00000455017 621 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC020890.1-201ENST00000491837 504 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC138938.1-201ENST00000515431 782 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC133555.2-201ENST00000550213 292 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 DUXAP6-201ENST00000553858 601 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 SETP1-201ENST00000556014 845 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 MIR5708-201ENST00000579723 85 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL139344.1-201ENST00000605228 195 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL451049.1-201ENST00000608672 497 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AP000238.1-201ENST00000608759 426 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 FAM27B-201ENST00000610601 213 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 AL592148.2-201ENST00000612210 372 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC026422.1-201ENST00000623961 452 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC087821.2-201ENST00000637086 450 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 AC104454.1-201ENST00000421341 1401 ntBASIC4.27□□□□□ -1.73
HLA-DOBP13765 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOBP13765 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOBP13765 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DOBP13765 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DOBP13765 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOBP13765 RNU1-82P-201ENST00000390851 165 ntBASIC4.26□□□□□ -1.73
HLA-DOBP13765 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DOBP13765 AL590290.1-201ENST00000405336 380 ntBASIC4.26□□□□□ -1.73
HLA-DOBP13765 AC114755.2-201ENST00000413520 361 ntBASIC4.26□□□□□ -1.73
HLA-DOBP13765 COX6B1P1-201ENST00000415962 213 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms