Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC6.46□□□□□ -1.38
CFTRP13569 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CFTRP13569 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CFTRP13569 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.46□□□□□ -1.38
CFTRP13569 RPS21P8-201ENST00000413365 247 ntBASIC6.46□□□□□ -1.38
CFTRP13569 AJ239321.1-201ENST00000424255 564 ntBASIC6.46□□□□□ -1.38
CFTRP13569 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.46□□□□□ -1.38
CFTRP13569 RPL32P34-201ENST00000486380 400 ntBASIC6.46□□□□□ -1.38
CFTRP13569 AC010285.3-201ENST00000511668 676 ntBASIC6.46□□□□□ -1.38
CFTRP13569 SNORA70.18-201ENST00000516696 98 ntBASIC6.46□□□□□ -1.38
CFTRP13569 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.46□□□□□ -1.38
CFTRP13569 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.46□□□□□ -1.38
CFTRP13569 AC133552.5-201ENST00000604266 540 ntBASIC6.46□□□□□ -1.38
CFTRP13569 AC024023.1-201ENST00000624530 922 ntBASIC6.46□□□□□ -1.38
CFTRP13569 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.46□□□□□ -1.38
CFTRP13569 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CFTRP13569 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.46□□□□□ -1.38
CFTRP13569 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CFTRP13569 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
CFTRP13569 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CFTRP13569 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CFTRP13569 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.45□□□□□ -1.38
CFTRP13569 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CFTRP13569 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC6.45□□□□□ -1.38
CFTRP13569 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CFTRP13569 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 BX119904.3-201ENST00000428194 957 ntBASIC6.45□□□□□ -1.38
CFTRP13569 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 AP001486.1-201ENST00000463339 476 ntBASIC6.45□□□□□ -1.38
CFTRP13569 RN7SL809P-201ENST00000482040 297 ntBASIC6.45□□□□□ -1.38
CFTRP13569 AGGF1P3-201ENST00000493675 1213 ntBASIC6.45□□□□□ -1.38
CFTRP13569 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 RN7SKP46-201ENST00000515942 234 ntBASIC6.45□□□□□ -1.38
CFTRP13569 RNA5SP208-201ENST00000516156 78 ntBASIC6.45□□□□□ -1.38
CFTRP13569 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.45□□□□□ -1.38
CFTRP13569 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.45□□□□□ -1.38
CFTRP13569 AC023509.5-201ENST00000617434 807 ntBASIC6.45□□□□□ -1.38
CFTRP13569 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.45□□□□□ -1.38
CFTRP13569 USP8P1-201ENST00000494673 3183 ntBASIC6.45□□□□□ -1.38
CFTRP13569 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CFTRP13569 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CFTRP13569 AL355596.1-201ENST00000565399 3996 ntBASIC6.44□□□□□ -1.38
CFTRP13569 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CFTRP13569 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CFTRP13569 SNRPCP3-201ENST00000474888 476 ntBASIC6.44□□□□□ -1.38
CFTRP13569 USP9YP2-201ENST00000504503 1000 ntBASIC6.44□□□□□ -1.38
CFTRP13569 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.44□□□□□ -1.38
CFTRP13569 USP9YP1-201ENST00000513521 1002 ntBASIC6.44□□□□□ -1.38
CFTRP13569 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.44□□□□□ -1.38
CFTRP13569 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.44□□□□□ -1.38
CFTRP13569 MIR4325-201ENST00000583049 90 ntBASIC6.44□□□□□ -1.38
CFTRP13569 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.44□□□□□ -1.38
CFTRP13569 AL354760.1-201ENST00000608357 643 ntBASIC6.44□□□□□ -1.38
CFTRP13569 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
CFTRP13569 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.44□□□□□ -1.38
CFTRP13569 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CFTRP13569 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CFTRP13569 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.43□□□□□ -1.38
CFTRP13569 VDAC2P1-201ENST00000399358 958 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AC096644.3-201ENST00000416788 338 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AC010740.1-201ENST00000417035 684 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.43□□□□□ -1.38
CFTRP13569 SNORA71B-202ENST00000439232 272 ntBASIC6.43□□□□□ -1.38
CFTRP13569 RPL37P3-201ENST00000456825 293 ntBASIC6.43□□□□□ -1.38
CFTRP13569 RN7SKP289-201ENST00000517244 295 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.43□□□□□ -1.38
CFTRP13569 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.43□□□□□ -1.38
CFTRP13569 MIR7112-201ENST00000616126 65 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AL773545.4-201ENST00000637262 310 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AP000553.6-201ENST00000641242 118 ntBASIC6.43□□□□□ -1.38
CFTRP13569 AL513478.4-201ENST00000641636 310 ntBASIC6.43□□□□□ -1.38
CFTRP13569 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CFTRP13569 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CFTRP13569 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.43□□□□□ -1.38
CFTRP13569 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CFTRP13569 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 Y_RNA.510-201ENST00000384511 114 ntBASIC6.42□□□□□ -1.38
CFTRP13569 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.42□□□□□ -1.38
CFTRP13569 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.42□□□□□ -1.38
CFTRP13569 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.42□□□□□ -1.38
CFTRP13569 AC090136.1-201ENST00000520009 240 ntBASIC6.42□□□□□ -1.38
CFTRP13569 HIGD1AP18-201ENST00000520730 278 ntBASIC6.42□□□□□ -1.38
CFTRP13569 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.42□□□□□ -1.38
CFTRP13569 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC6.42□□□□□ -1.38
CFTRP13569 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CFTRP13569 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CFTRP13569 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms