Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC009263.1-201ENST00000441193 1239 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC092905.1-201ENST00000467527 949 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 HMGB1P38-201ENST00000490557 577 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 PRELID3BP5-201ENST00000508612 460 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC008562.1-201ENST00000521763 330 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 YWHAZP1-201ENST00000556286 722 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC023824.3-201ENST00000569003 562 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 PCNAP1-202ENST00000595299 752 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 RPL12P25-202ENST00000598100 674 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 NTAN1P1-201ENST00000603150 646 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC073091.2-201ENST00000603205 907 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC083809.1-201ENST00000615051 472 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC017104.5-201ENST00000637647 639 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC013437.2-201ENST00000639587 677 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AL118496.1-201ENST00000440201 1812 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 DHX9P1-201ENST00000436565 3076 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 AC093535.2-201ENST00000624769 2326 ntBASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RAB40ALP0C0E4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 SNORA11C-201ENST00000408532 129 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 RNU2-6P-201ENST00000411404 190 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 NMNAT1P2-201ENST00000435192 860 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 EIF2S2P2-201ENST00000447161 982 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC079168.2-201ENST00000453977 416 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MTATP6P14-201ENST00000455189 673 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MTND2P28-201ENST00000457540 1044 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC025164.1-201ENST00000496249 478 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC098799.3-201ENST00000506095 438 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC069306.1-201ENST00000507006 843 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 IGBP1P5-201ENST00000507524 1000 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 RN7SKP283-201ENST00000517197 270 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC136624.4-201ENST00000573044 370 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MIR4277-201ENST00000578298 84 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AP002802.2-201ENST00000605877 235 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC100847.1-201ENST00000611316 481 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC006338.2-201ENST00000616864 791 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC004232.3-201ENST00000622977 525 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AL359757.1-201ENST00000623176 255 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AL590396.4-201ENST00000636779 956 ntBASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB40ALP0C0E4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 AL451142.2-201ENST00000429076 2090 ntBASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 CASC19-206ENST00000641028 1430 ntBASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
RAB40ALP0C0E4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms