Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL356981.1-201ENST00000454879 684 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC245028.2-201ENST00000458673 253 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC025459.1-201ENST00000504072 156 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AF213884.2-201ENST00000510417 903 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 MTCYBP37-201ENST00000510642 1133 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 RNU6-759P-201ENST00000516740 103 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 RNU6-1308P-201ENST00000516817 103 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 HIGD1AP18-201ENST00000520730 278 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC011611.5-201ENST00000552477 578 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 DPRXP4-201ENST00000578053 568 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 ZNF849P-201ENST00000594711 1566 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 SGO1P1-201ENST00000603525 1447 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL353600.1-201ENST00000608148 251 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL450489.1-201ENST00000612071 468 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AP000432.2-201ENST00000624164 2048 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 SAMMSON-210ENST00000641260 1308 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC010300.1-201ENST00000600671 5134 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL021407.1-201ENST00000404531 386 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 Y_RNA.619-201ENST00000410951 90 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 COX6CP17-201ENST00000421389 185 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RPS27AP7-201ENST00000422792 455 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RPF2P1-201ENST00000424137 906 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RPL18P10-201ENST00000425606 538 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 MRPL35P4-201ENST00000453682 566 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 RPL31P3-201ENST00000458430 332 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC021660.1-201ENST00000465006 554 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CDH12P2-201ENST00000504393 298 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RPF2P2-201ENST00000504693 896 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC093815.1-201ENST00000508637 280 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 RN7SKP34-201ENST00000516142 244 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 RNA5SP303-201ENST00000516192 130 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC009643.1-201ENST00000532030 391 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC023161.2-201ENST00000551218 780 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 MIR4715-201ENST00000584117 79 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC073091.2-201ENST00000603205 907 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms