Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC084759.1-201ENST00000561168 290 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 AC006960.3-201ENST00000561845 705 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.1□□□□□ -1.59
COL5A2P05997 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL5A2P05997 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL5A2P05997 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL5A2P05997 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.1□□□□□ -1.59
COL5A2P05997 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL5A2P05997 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.09□□□□□ -1.59
COL5A2P05997 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL5A2P05997 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL5A2P05997 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.09□□□□□ -1.59
COL5A2P05997 AC004448.2-201ENST00000422360 586 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.09□□□□□ -1.59
COL5A2P05997 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.09□□□□□ -1.59
COL5A2P05997 HMGN2P27-201ENST00000427352 270 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.09□□□□□ -1.59
COL5A2P05997 RWDD4P1-201ENST00000488019 565 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.09□□□□□ -1.59
COL5A2P05997 AC016550.3-201ENST00000515706 767 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.09□□□□□ -1.59
COL5A2P05997 AL121839.2-201ENST00000565058 6943 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL5A2P05997 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL5A2P05997 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL5A2P05997 AC005261.6-201ENST00000623072 1387 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL5A2P05997 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
COL5A2P05997 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.09□□□□□ -1.59
COL5A2P05997 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.09□□□□□ -1.59
COL5A2P05997 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL5A2P05997 MTCO1P46-201ENST00000451639 1491 ntBASIC5.09□□□□□ -1.59
COL5A2P05997 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
COL5A2P05997 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
COL5A2P05997 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.09□□□□□ -1.6
COL5A2P05997 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.09□□□□□ -1.6
COL5A2P05997 MAPK10-320ENST00000641462 6696 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL5A2P05997 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL5A2P05997 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL5A2P05997 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.08□□□□□ -1.6
COL5A2P05997 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL5A2P05997 UBE2V2P3-201ENST00000433562 437 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 AC092641.1-201ENST00000440229 772 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL5A2P05997 RPS17P13-201ENST00000448974 407 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 SETP6-201ENST00000479329 568 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.08□□□□□ -1.6
COL5A2P05997 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC008694.2-201ENST00000517591 306 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 AC022695.1-201ENST00000522089 237 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC084033.1-201ENST00000550830 633 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 SLC25A36P1-201ENST00000590111 465 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.08□□□□□ -1.6
COL5A2P05997 AC007342.9-201ENST00000623877 1385 ntBASIC5.08□□□□□ -1.6
COL5A2P05997 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.08□□□□□ -1.6
COL5A2P05997 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL5A2P05997 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL5A2P05997 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL5A2P05997 RPL7AP73-201ENST00000413490 353 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 BX119904.3-201ENST00000428194 957 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.07□□□□□ -1.6
COL5A2P05997 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC090602.1-201ENST00000469695 252 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC115989.2-201ENST00000578640 563 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC079880.2-201ENST00000603790 1213 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AC026790.2-201ENST00000606282 430 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 ZNF833P-201ENST00000424938 1494 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL5A2P05997 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.07□□□□□ -1.6
COL5A2P05997 RNU1-15P-201ENST00000353977 144 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 Y_RNA.111-201ENST00000363248 100 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 RNU1-33P-201ENST00000364249 162 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 MIR195-201ENST00000385194 87 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 VN1R8P-201ENST00000407739 893 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 MIR1251-201ENST00000408552 70 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 SNORA3C-201ENST00000408792 125 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.07□□□□□ -1.6
COL5A2P05997 DPY19L1P2-201ENST00000426647 915 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 MTCO3P17-201ENST00000443775 513 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms