Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.22□□□□□ -1.89
IFNA1P01562 CR381670.1-201ENST00000624291 1693 ntBASIC3.22□□□□□ -1.89
IFNA1P01562 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
IFNA1P01562 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.22□□□□□ -1.89
IFNA1P01562 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 AP001148.1-201ENST00000624124 2359 ntBASIC3.22□□□□□ -1.89
IFNA1P01562 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFNA1P01562 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
IFNA1P01562 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
IFNA1P01562 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 OR4K17-201ENST00000315543 1032 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 ATP5F1P4-201ENST00000397288 746 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.21□□□□□ -1.9
IFNA1P01562 HSPE1P8-201ENST00000406997 288 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 RPL30P2-201ENST00000414021 291 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AC009237.5-201ENST00000414271 501 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.21□□□□□ -1.9
IFNA1P01562 RPL24P2-201ENST00000421023 475 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 NPM1P34-201ENST00000428821 893 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.21□□□□□ -1.9
IFNA1P01562 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.21□□□□□ -1.9
IFNA1P01562 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.21□□□□□ -1.9
IFNA1P01562 RPS20P32-201ENST00000456044 356 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 RPL5P23-201ENST00000496040 868 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 HMGB1P21-201ENST00000502313 581 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.21□□□□□ -1.9
IFNA1P01562 IGLVIV-64-201ENST00000518581 301 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.21□□□□□ -1.9
IFNA1P01562 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.21□□□□□ -1.9
IFNA1P01562 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.21□□□□□ -1.9
IFNA1P01562 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.21□□□□□ -1.9
IFNA1P01562 AC012417.1-201ENST00000582307 1039 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AC087763.1-201ENST00000603391 286 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.21□□□□□ -1.9
IFNA1P01562 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 MIR6853-201ENST00000619642 74 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 AC112694.2-201ENST00000623697 768 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.21□□□□□ -1.9
IFNA1P01562 AC119744.1-201ENST00000454746 1715 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 PABPC1P6-201ENST00000445594 1829 ntBASIC3.21□□□□□ -1.9
IFNA1P01562 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.21□□□□□ -1.9
IFNA1P01562 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFNA1P01562 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 RNU4-4P-201ENST00000364588 130 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 MIR320B1-201ENST00000390209 79 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 HLFP1-201ENST00000402375 499 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC007390.1-201ENST00000415722 356 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 P2RY10P2-201ENST00000416730 913 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC127526.1-201ENST00000417526 366 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 HMGB1P32-201ENST00000425971 565 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC005154.2-201ENST00000438110 379 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AL512326.1-201ENST00000443050 721 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 AL049830.2-201ENST00000480072 201 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 RN7SL741P-201ENST00000482473 289 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 UBA52P7-201ENST00000486088 380 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 RPS27AP16-201ENST00000492222 470 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 BTF3P13-201ENST00000513224 490 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 RN7SKP83-201ENST00000516512 178 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 HIGD1AP10-201ENST00000527837 282 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.2□□□□□ -1.9
IFNA1P01562 EDDM3DP-201ENST00000554692 434 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms