Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL135786.2-201ENST00000608422 615 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.42□□□□□ -1.7
TIMP1P01033 AC005344.1-201ENST00000613391 459 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 AC019278.1-201ENST00000623516 479 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.42□□□□□ -1.7
TIMP1P01033 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.42□□□□□ -1.7
TIMP1P01033 U6.105-201ENST00000637379 88 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TIMP1P01033 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TIMP1P01033 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TIMP1P01033 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.42□□□□□ -1.7
TIMP1P01033 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 AP004289.2-201ENST00000444413 1457 ntBASIC4.42□□□□□ -1.7
TIMP1P01033 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TIMP1P01033 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.41□□□□□ -1.7
TIMP1P01033 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 Y_RNA.62-201ENST00000362840 99 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TIMP1P01033 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TIMP1P01033 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 RPS26P4-201ENST00000431743 355 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 AC104306.1-201ENST00000449702 371 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 OR6C72P-201ENST00000451403 892 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 AC108022.1-201ENST00000493466 478 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 RPL29P14-201ENST00000495837 428 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.41□□□□□ -1.7
TIMP1P01033 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.41□□□□□ -1.7
TIMP1P01033 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 AC087499.8-201ENST00000578406 226 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.41□□□□□ -1.7
TIMP1P01033 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.41□□□□□ -1.7
TIMP1P01033 AL137072.1-201ENST00000603444 466 ntBASIC4.41□□□□□ -1.7
TIMP1P01033 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
TIMP1P01033 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.41□□□□□ -1.7
TIMP1P01033 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TIMP1P01033 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.4□□□□□ -1.7
TIMP1P01033 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TIMP1P01033 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.4□□□□□ -1.7
TIMP1P01033 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.4□□□□□ -1.71
TIMP1P01033 RNU4-44P-201ENST00000363050 141 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 RNU6-1331P-201ENST00000363658 106 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 RNA5SP22-201ENST00000365393 109 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 RPS29P4-201ENST00000414733 161 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.4□□□□□ -1.71
TIMP1P01033 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.4□□□□□ -1.71
TIMP1P01033 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
TIMP1P01033 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TIMP1P01033 NPM1P39-201ENST00000449818 867 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC007967.1-201ENST00000455422 1159 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 RPL36AP13-201ENST00000457490 317 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 TPT1P1-201ENST00000458495 518 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.4□□□□□ -1.71
TIMP1P01033 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 KRT19P6-201ENST00000510983 209 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.4□□□□□ -1.71
TIMP1P01033 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.4□□□□□ -1.71
TIMP1P01033 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 OR8I1P-201ENST00000529291 931 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.4□□□□□ -1.71
TIMP1P01033 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.4□□□□□ -1.71
TIMP1P01033 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.4□□□□□ -1.71
TIMP1P01033 GTF2IP22-201ENST00000554443 182 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC027176.2-201ENST00000559166 746 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 CD24P2-201ENST00000565486 219 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 MIR3936-201ENST00000584304 110 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.4□□□□□ -1.71
TIMP1P01033 AC092354.2-201ENST00000607786 514 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.4□□□□□ -1.71
TIMP1P01033 AC020658.4-201ENST00000613987 684 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 AL442067.2-201ENST00000614033 363 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.4□□□□□ -1.71
TIMP1P01033 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.4□□□□□ -1.71
TIMP1P01033 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TIMP1P01033 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TIMP1P01033 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TIMP1P01033 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TIMP1P01033 MTND5P1-201ENST00000445440 1375 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 BTBD10P1-201ENST00000549824 1352 ntBASIC4.4□□□□□ -1.71
TIMP1P01033 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.71
TIMP1P01033 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.39□□□□□ -1.71
TIMP1P01033 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
TIMP1P01033 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms