Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.1□□□□□ -1.59
PROM1O43490 BTBD10P1-201ENST00000549824 1352 ntBASIC5.1□□□□□ -1.59
PROM1O43490 NMNAT1P5-201ENST00000559657 841 ntBASIC5.1□□□□□ -1.59
PROM1O43490 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC006362.1-201ENST00000567392 174 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC010546.1-201ENST00000569391 485 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC005341.1-201ENST00000571086 708 ntBASIC5.1□□□□□ -1.59
PROM1O43490 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 RN7SL356P-201ENST00000582228 248 ntBASIC5.1□□□□□ -1.59
PROM1O43490 VN1R88P-201ENST00000596787 292 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC073544.2-201ENST00000601155 540 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC108738.1-201ENST00000603703 237 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC131235.4-201ENST00000609288 620 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC097505.1-201ENST00000610199 565 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC244107.2-201ENST00000611773 76 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 AC011472.4-201ENST00000615848 491 ntBASIC5.1□□□□□ -1.59
PROM1O43490 MIR7155-201ENST00000615925 56 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC025263.3-201ENST00000622965 1396 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC116618.1-201ENST00000634617 774 ntBASIC5.1□□□□□ -1.59
PROM1O43490 U6.107-201ENST00000637108 79 ntBASIC5.1□□□□□ -1.59
PROM1O43490 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PROM1O43490 AC093591.2-201ENST00000565254 3843 ntBASIC5.1□□□□□ -1.59
PROM1O43490 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.1□□□□□ -1.59
PROM1O43490 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
PROM1O43490 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 AC090017.1-201ENST00000548612 1779 ntBASIC5.09□□□□□ -1.59
PROM1O43490 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PROM1O43490 RNU6-253P-201ENST00000384730 105 ntBASIC5.09□□□□□ -1.59
PROM1O43490 MIR320B1-201ENST00000390209 79 ntBASIC5.09□□□□□ -1.59
PROM1O43490 SNORA26.8-201ENST00000391306 124 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AL133388.1-201ENST00000404509 287 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC092745.2-202ENST00000411880 369 ntBASIC5.09□□□□□ -1.59
PROM1O43490 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PROM1O43490 AL022400.1-201ENST00000423946 935 ntBASIC5.09□□□□□ -1.59
PROM1O43490 CDY14P-201ENST00000431260 1014 ntBASIC5.09□□□□□ -1.59
PROM1O43490 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 RPL7P29-201ENST00000437151 728 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 CDY23P-201ENST00000451661 1014 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 DNAJC19P8-201ENST00000452887 259 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 COPS8P2-201ENST00000473228 627 ntBASIC5.09□□□□□ -1.59
PROM1O43490 RN7SL826P-201ENST00000479724 288 ntBASIC5.09□□□□□ -1.59
PROM1O43490 NCOR1P1-202ENST00000486162 291 ntBASIC5.09□□□□□ -1.59
PROM1O43490 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC073358.1-201ENST00000505671 684 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC006499.3-201ENST00000506077 748 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 AC109445.1-201ENST00000512356 383 ntBASIC5.09□□□□□ -1.59
PROM1O43490 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 HMGN1P9-201ENST00000515212 298 ntBASIC5.09□□□□□ -1.59
PROM1O43490 HNRNPKP5-201ENST00000515300 253 ntBASIC5.09□□□□□ -1.59
PROM1O43490 RNA5SP92-201ENST00000516437 110 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC060788.1-201ENST00000521318 469 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC092851.1-201ENST00000535964 478 ntBASIC5.09□□□□□ -1.59
PROM1O43490 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 ZNF415P1-201ENST00000582279 1166 ntBASIC5.09□□□□□ -1.59
PROM1O43490 MIR3611-201ENST00000584484 83 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.09□□□□□ -1.59
PROM1O43490 SUGT1P3-202ENST00000604259 383 ntBASIC5.09□□□□□ -1.59
PROM1O43490 MIR6748-201ENST00000610433 71 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC005332.10-201ENST00000612725 619 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AC008083.4-201ENST00000615076 444 ntBASIC5.09□□□□□ -1.59
PROM1O43490 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.09□□□□□ -1.59
PROM1O43490 AC109583.2-201ENST00000617367 129 ntBASIC5.09□□□□□ -1.59
PROM1O43490 AP003400.3-201ENST00000624904 346 ntBASIC5.09□□□□□ -1.59
PROM1O43490 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PROM1O43490 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PROM1O43490 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.09□□□□□ -1.59
PROM1O43490 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PROM1O43490 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PROM1O43490 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PROM1O43490 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PROM1O43490 AC004817.4-201ENST00000602396 3625 ntBASIC5.09□□□□□ -1.6
PROM1O43490 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.09□□□□□ -1.6
PROM1O43490 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.6
PROM1O43490 NSRP1P1-201ENST00000444067 1693 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms