Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 AC087821.2-201ENST00000637086 450 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 MUC2-202ENST00000613187 4845 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM38O00635 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 SMG1P6-201ENST00000532337 2930 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM38O00635 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM38O00635 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM38O00635 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM38O00635 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM38O00635 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
TRIM38O00635 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 Z95331.1-201ENST00000623075 23112 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 OR9G4-201ENST00000302957 984 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 SNURFL-201ENST00000309296 343 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM38O00635 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM38O00635 RNU6-619P-201ENST00000365146 108 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 OR1L1-202ENST00000373686 1083 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 RNA5SP296-201ENST00000410523 111 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 RN7SKP97-201ENST00000410966 333 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC084290.1-201ENST00000434995 374 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 EEF1A1P39-201ENST00000440791 250 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 GTF3AP5-201ENST00000442645 697 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM38O00635 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM38O00635 MTND2P28-201ENST00000457540 1044 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 AC007686.1-201ENST00000488511 463 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM38O00635 NIFKP7-201ENST00000503365 834 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 NRON-201ENST00000517270 370 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM38O00635 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC022884.2-201ENST00000578535 580 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC068790.7-201ENST00000602347 528 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC009597.2-201ENST00000604659 592 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC018638.7-201ENST00000605836 1114 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 AC135507.1-201ENST00000607214 561 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM38O00635 AC011330.2-201ENST00000621680 635 ntBASIC5.17□□□□□ -1.58
TRIM38O00635 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM38O00635 AC000367.1-201ENST00000452711 1766 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AL355852.1-201ENST00000454081 1771 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 AC008079.2-201ENST00000623543 20396 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM38O00635 Y_RNA.472-201ENST00000384322 102 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 MIR600-201ENST00000385007 98 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 DBIP1-201ENST00000401435 260 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AL138880.1-201ENST00000405824 642 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM38O00635 RAC1P8-201ENST00000427086 527 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 HIGD1AP12-201ENST00000427832 281 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM38O00635 CNOT7P1-201ENST00000429006 852 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms