Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 MT-RNR1-201ENST00000389680 954 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 HMGB3P19-201ENST00000403971 560 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 EIF4A1P3-201ENST00000411521 244 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC011933.1-201ENST00000413334 321 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 IFNNP1-201ENST00000429219 553 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 HMGB1P37-201ENST00000439613 609 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 NDUFA12P1-201ENST00000455914 406 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AL133244.1-201ENST00000456007 258 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC116533.1-201ENST00000459748 321 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC092691.2-201ENST00000461787 803 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC013356.1-201ENST00000489027 564 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC002456.2-201ENST00000509356 380 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC009268.1-201ENST00000561352 1203 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC005191.1-201ENST00000603950 358 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC008745.1-201ENST00000604064 271 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AL021368.1-201ENST00000607490 540 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC007620.3-201ENST00000608131 497 ntBASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM49D1C9J1S8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 HMGN2P8-201ENST00000391458 268 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 RPS4XP9-201ENST00000405151 780 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC009302.1-201ENST00000417147 390 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AL590762.3-201ENST00000436372 640 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 Z95152.1-201ENST00000453556 656 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 RPL10P17-201ENST00000453852 316 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 RPL38P1-201ENST00000460914 211 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC105918.1-201ENST00000474399 838 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 RN7SL459P-201ENST00000481078 302 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 UBA52P3-201ENST00000491303 382 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC005798.1-201ENST00000513715 387 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 MIR2114-201ENST00000516645 80 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC104997.1-201ENST00000519761 717 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 EIF1P6-201ENST00000600054 334 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC073592.7-201ENST00000623659 507 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 AC020923.1-201ENST00000624021 917 ntBASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TRIM49D1C9J1S8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 ELOCP19-201ENST00000411919 318 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 HSPE1P12-201ENST00000412576 301 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AL590609.2-201ENST00000421430 368 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 FAR2P4-202ENST00000425399 584 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 CBX1P1-201ENST00000440184 427 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 TXNP2-201ENST00000443918 295 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC022431.1-201ENST00000450941 438 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AL049829.1-201ENST00000465411 156 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC006463.2-201ENST00000473326 348 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 RN7SL604P-201ENST00000492589 296 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC004069.2-201ENST00000505438 1114 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC025674.1-201ENST00000507074 324 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 IGBP1P5-201ENST00000507524 1000 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC108475.1-201ENST00000507880 950 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms