Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC091868.1-201ENST00000508746 304 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RNU6-416P-201ENST00000516265 103 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 IGLV2-28-201ENST00000520681 304 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 OR8I1P-201ENST00000529291 931 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC087897.1-201ENST00000550134 156 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC079075.1-201ENST00000559543 878 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 NIFKP8-201ENST00000560500 874 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC022069.1-201ENST00000582910 658 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC090330.1-201ENST00000588646 764 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC010857.1-201ENST00000606398 594 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC105227.2-201ENST00000615075 605 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC022960.3-201ENST00000619794 441 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 CASC19-222ENST00000641321 1173 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 IRF5P1-201ENST00000504852 2164 ntBASIC3.82□□□□□ -1.8
SRRM4A7MD48 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SRRM4A7MD48 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM4A7MD48 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 MAPK10-349ENST00000641767 3661 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 SAMMSON-226ENST00000642089 1582 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 NCLP2-201ENST00000416078 1462 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 RNU1-82P-201ENST00000390851 165 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL603865.2-201ENST00000401679 213 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 RNU4-34P-201ENST00000410431 124 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC114755.2-201ENST00000413520 361 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPS7P9-201ENST00000414704 586 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPL23AP27-201ENST00000415161 451 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 OR2AM1P-201ENST00000422137 422 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 FABP7P1-201ENST00000424004 391 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC092634.2-201ENST00000428146 1010 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 OR2B7P-201ENST00000429302 934 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPS27P18-201ENST00000431701 247 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 HMGB1P45-201ENST00000435986 653 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPS26P56-201ENST00000444468 240 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL358794.1-201ENST00000445689 381 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPL23AP15-201ENST00000450202 459 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC244505.3-201ENST00000454598 187 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 RPS27P23-201ENST00000487608 251 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC010374.2-201ENST00000512933 535 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 snoZ278.1-201ENST00000517059 112 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AF279873.1-201ENST00000523393 313 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 OR5AZ1P-201ENST00000527448 943 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 OR8K4P-201ENST00000534608 872 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM4A7MD48 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 HMGN2P6-201ENST00000551091 273 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AL161713.1-201ENST00000555538 145 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC069304.3-201ENST00000603938 1084 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC005191.1-201ENST00000603950 358 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC099676.1-201ENST00000608886 657 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 FAM27B-201ENST00000610601 213 ntBASIC3.81□□□□□ -1.8
SRRM4A7MD48 AC016769.4-201ENST00000616893 535 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms