Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AF230666.2-201ENST00000602328 725 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC008782.1-201ENST00000603386 430 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC133552.5-201ENST00000604266 540 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC010201.1-201ENST00000605051 540 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AL158211.2-201ENST00000607282 395 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC006946.3-201ENST00000609791 756 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 CR392039.4-201ENST00000624968 501 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC083865.1-201ENST00000636634 831 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 AC092162.3-201ENST00000624511 1624 ntBASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATG4BQ9Y4P1 RAD17P1-201ENST00000418130 2042 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RNU1-20P-201ENST00000363314 162 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 PTGES3P2-201ENST00000407942 482 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RPS27AP7-201ENST00000422792 455 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC009480.2-201ENST00000422916 432 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RPL12P28-201ENST00000430852 489 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC069540.1-201ENST00000446320 988 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 CYCSP42-201ENST00000450823 238 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RPS27AP17-201ENST00000463344 455 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RPL23AP65-201ENST00000475608 468 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC090013.1-201ENST00000485147 480 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 CEACAMP10-202ENST00000495431 496 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 PGBD4P4-201ENST00000509673 613 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC092593.2-201ENST00000513866 913 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 SNORA26.10-201ENST00000516427 141 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 VTA1P2-201ENST00000520205 911 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 C1GALT1P3-201ENST00000522049 819 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 MIR4512-201ENST00000583257 77 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 RPL12P25-202ENST00000598100 674 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC115286.1-201ENST00000604298 434 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC005972.3-201ENST00000606304 481 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC245389.2-201ENST00000616023 576 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AL158196.1-201ENST00000616786 434 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC242843.1-201ENST00000618702 573 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 MIR6891-201ENST00000618788 93 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AP005019.3-201ENST00000620418 560 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC006065.6-201ENST00000625201 545 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 OR56B2P-202ENST00000641377 2453 ntBASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ATG4BQ9Y4P1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
ATG4BQ9Y4P1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC019155.1-201ENST00000382242 574 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 MIR142-201ENST00000384835 87 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 CEACAMP8-201ENST00000413902 580 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 SNRPFP1-201ENST00000414761 252 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 FTH1P16-201ENST00000435241 552 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 DDX39BP2-208ENST00000453923 258 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 MTND2P28-201ENST00000457540 1044 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 APOOP2-201ENST00000461561 539 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 RPL21P126-201ENST00000470049 478 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 DEFB109F-201ENST00000491870 277 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP497-201ENST00000516081 97 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AF186190.1-201ENST00000517470 480 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL121594.4-201ENST00000556211 1196 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 MTND4LP24-201ENST00000572277 291 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms