Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 OR52B1P-201ENST00000316506 909 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.157-201ENST00000363638 102 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.231-201ENST00000364358 102 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 MIR143-201ENST00000385300 106 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 RPS3AP36-201ENST00000398190 775 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 RNU2-17P-201ENST00000410290 190 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 RPS17P17-201ENST00000419392 409 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 GTF2IP23-201ENST00000423746 351 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 GTF2IP20-201ENST00000431663 360 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AL627308.1-201ENST00000435693 821 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AL353662.1-201ENST00000439099 327 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 RPL23AP35-201ENST00000451906 501 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC007967.1-201ENST00000455422 1159 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 HMGN2P26-201ENST00000463169 339 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 MIR3910-1-201ENST00000580936 111 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC024560.3-201ENST00000608482 349 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC069542.2-201ENST00000624816 216 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC135068.12-201ENST00000637370 931 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 NSRP1P1-201ENST00000444067 1693 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC123769.1-201ENST00000530992 3192 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 GDI2P1-201ENST00000429312 1336 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AC005261.2-201ENST00000593427 4258 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AL137058.3-201ENST00000624531 3099 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.184-201ENST00000363884 108 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-353P-201ENST00000364266 108 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-1103P-201ENST00000384150 107 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-33P-201ENST00000384793 107 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AL096800.1-201ENST00000405326 893 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SKP29-201ENST00000410957 272 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 TAF13P2-201ENST00000416876 286 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 CBWD4P-201ENST00000445695 655 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC073415.1-201ENST00000449240 153 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 VPS25P1-201ENST00000455691 508 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RPS4XP12-201ENST00000461747 709 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 RPL7P39-201ENST00000481157 744 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC034159.1-201ENST00000513885 583 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC021733.2-201ENST00000518830 497 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 GTF2IP11-201ENST00000526931 420 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC104785.1-201ENST00000603220 588 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC007938.3-201ENST00000604965 623 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AP003789.1-201ENST00000617737 605 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC022418.1-201ENST00000624118 445 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AP000648.2-201ENST00000624182 404 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 AC138627.2-201ENST00000624202 601 ntBASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.93□□□□□ -1.14
PDZRN3Q9UPQ7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms