Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AP000763.2-201ENST00000540641 163 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC005519.1-201ENST00000554490 601 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MIR3672-201ENST00000584290 82 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC026634.1-201ENST00000634369 198 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 CLCA3P-203ENST00000490028 2781 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC235565.1-201ENST00000456962 1325 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 MROH3P-201ENST00000435735 2676 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC127070.3-201ENST00000503695 3263 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 SPATA2P1-201ENST00000431223 2055 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RNU6-1290P-201ENST00000362957 109 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 SNORA7A-201ENST00000384765 139 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RNU4-25P-201ENST00000410569 230 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC092832.1-201ENST00000422934 400 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RPS3AP38-201ENST00000435889 763 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC064862.5-201ENST00000440618 334 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 IGKV1OR-3-201ENST00000446944 348 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC114324.2-202ENST00000503812 134 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 MRPL57P6-201ENST00000506570 309 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RN7SKP219-201ENST00000516825 296 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC084337.1-201ENST00000524809 686 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC026956.1-201ENST00000558741 396 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AC092111.1-201ENST00000618256 3358 ntBASIC8.78□□□□□ -1
TRIM35Q9UPQ4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.78□□□□□ -1
TRIM35Q9UPQ4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
TRIM35Q9UPQ4 MAPK10-365ENST00000641902 3825 ntBASIC8.77□□□□□ -1
TRIM35Q9UPQ4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 PPIAP24-201ENST00000328558 471 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-338P-201ENST00000383888 105 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 MIR613-201ENST00000385248 95 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 RNU2-20P-201ENST00000410425 191 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 HSPE1P16-201ENST00000426640 348 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms