Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 RNA5SP46-201ENST00000362370 120 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 RNA5SP510-201ENST00000364697 99 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 RN7SKP292-201ENST00000365522 317 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 PEX12P1-201ENST00000400284 1048 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AL121978.1-201ENST00000402778 359 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 Y_RNA.619-201ENST00000410951 90 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 OR2AT2P-201ENST00000413438 905 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 OR6E1P-201ENST00000414424 923 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 RPL34P3-201ENST00000421454 338 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC010881.1-201ENST00000433830 235 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC073109.1-201ENST00000445066 978 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC109486.1-201ENST00000486833 374 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 EIF3LP3-201ENST00000495197 822 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC090071.1-201ENST00000507713 644 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AP000873.5-201ENST00000533906 236 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC022880.1-201ENST00000534017 973 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AL049872.1-201ENST00000556323 322 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC017100.2-201ENST00000584628 355 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 PRPF19P1-201ENST00000584766 898 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC012616.1-201ENST00000600294 197 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC083899.3-201ENST00000603413 594 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AL118522.2-201ENST00000616045 615 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC079228.1-201ENST00000624774 1049 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC120349.2-201ENST00000625002 298 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 AC092184.1-201ENST00000625042 715 ntBASIC5.01□□□□□ -1.61
RLIMQ9NVW2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.01□□□□□ -1.61
RLIMQ9NVW2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 SMG1P7-201ENST00000565246 2704 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 RPL21P132-201ENST00000331267 462 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5□□□□□ -1.61
RLIMQ9NVW2 RNU5F-7P-201ENST00000363696 115 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5□□□□□ -1.61
RLIMQ9NVW2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 FABP12P1-201ENST00000401911 322 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AP000534.2-201ENST00000412729 568 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 GSTM3P2-201ENST00000412746 530 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 Z99497.1-201ENST00000421282 135 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5□□□□□ -1.61
RLIMQ9NVW2 RPL37P1-201ENST00000432310 284 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5□□□□□ -1.61
RLIMQ9NVW2 B3GNT2P1-201ENST00000434960 952 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 COX6CP2-201ENST00000444980 225 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 MTND1P27-201ENST00000451117 902 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 SNRPGP9-201ENST00000456025 225 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC245028.2-201ENST00000458673 253 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC006511.1-201ENST00000470614 315 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC007998.1-201ENST00000474156 672 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC013828.1-201ENST00000481845 158 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms