Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 CYP1D1P-201ENST00000416662 1433 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AL590704.1-201ENST00000402856 794 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ELOCP8-201ENST00000439309 332 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 HMGB1P37-201ENST00000439613 609 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ELOCP15-201ENST00000442090 332 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 VN1R34P-201ENST00000447387 883 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC092691.2-201ENST00000461787 803 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC091564.1-201ENST00000464563 479 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC022336.1-201ENST00000475510 337 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 RN7SKP141-201ENST00000516167 338 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 SCARNA14-201ENST00000516903 136 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC008802.1-201ENST00000519121 791 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 RPL23AP87-202ENST00000573039 466 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC091167.4-201ENST00000605079 184 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AL592436.1-201ENST00000605135 558 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 MIR6868-201ENST00000611215 58 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 SNORA60-201ENST00000362396 134 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 RNA5SP387-201ENST00000364226 106 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 OR2X1P-201ENST00000421144 687 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 RPL5P16-201ENST00000471467 790 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 NDUFB4P12-201ENST00000513465 390 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC015726.1-201ENST00000602353 681 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC012603.1-201ENST00000606424 528 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC074276.2-201ENST00000619891 348 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC055839.1-201ENST00000634467 498 ntBASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KIAA1549Q9HCM3 RNU1-85P-201ENST00000364127 164 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 NANOGP10-201ENST00000453325 895 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 RNU6-1334P-201ENST00000516032 105 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AC079684.1-201ENST00000621405 437 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL354798.1-201ENST00000622505 329 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 USP8P1-201ENST00000494673 3183 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 ZNF285B-201ENST00000561698 1767 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AC017007.4-201ENST00000503353 1352 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 SOD2P1-201ENST00000396543 562 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 GAPDHP36-201ENST00000480688 918 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 STMN1P2-201ENST00000508435 439 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 RNU7-143P-201ENST00000516781 65 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms