Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 ZNF90P1-201ENST00000480493 1951 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 EOGT-210ENST00000615922 1931 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 MAPK10-286ENST00000641208 8747 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC087650.1-201ENST00000431445 468 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC010285.3-201ENST00000511668 676 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 LARP7P3-201ENST00000579888 337 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AL451007.1-201ENST00000595491 289 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AL355365.1-201ENST00000616480 294 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ASNSP3-201ENST00000451989 1306 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 DPY19L1P2-201ENST00000426647 915 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 RANP8-201ENST00000444720 713 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 NANOGNBP1-201ENST00000448444 480 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC245517.4-201ENST00000448601 281 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 RSL24D1P3-201ENST00000449255 495 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 RPL7P22-201ENST00000466005 733 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC108145.1-201ENST00000503770 153 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC136777.2-201ENST00000522979 358 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 CR383656.14-201ENST00000551951 406 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 OR8G7P-201ENST00000616658 848 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AC073530.2-201ENST00000623987 261 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AP000648.2-201ENST00000624182 404 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD8Q9HCK8 CDY3P-201ENST00000454543 1618 ntBASIC3.73□□□□□ -1.81
CHD8Q9HCK8 AL034370.1-201ENST00000397254 1590 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 RNU4-82P-201ENST00000362443 140 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 RNA5SP175-201ENST00000364275 119 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AC020914.6-201ENST00000594327 272 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 BNIP3P41-202ENST00000616656 861 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AL031595.2-201ENST00000624215 19071 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 MIR1179-201ENST00000408703 91 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AL603825.1-201ENST00000438481 80 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 RPL36AP13-201ENST00000457490 317 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 RNA5SP445-201ENST00000515889 115 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 NCAPGP2-201ENST00000557911 754 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 MIR3922-201ENST00000585192 84 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AC005344.1-201ENST00000613391 459 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 MIR8069-1-201ENST00000616627 86 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 MIR8069-2-201ENST00000621412 86 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 CASC19-206ENST00000641028 1430 ntBASIC3.72□□□□□ -1.81
CHD8Q9HCK8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
CHD8Q9HCK8 AL161912.2-201ENST00000565707 3007 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms